Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446240
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Entry
135446240 CDS
T09958
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle00100
Steroid biosynthesis
zle01100
Metabolic pathways
Module
zle_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
135446240 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zle01006
]
135446240 (FDFT1)
Enzymes [BR:
zle01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
135446240 (FDFT1)
Prenyltransferases [BR:
zle01006
]
Terpene biosynthesis
Squalene/phytoene synthase
135446240 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
135446240
NCBI-ProteinID:
XP_064566008
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All DBs
Position
3:complement(110239200..110253595)
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AA seq
418 aa
AA seq
DB search
MELLRKWLGHPEDIYNLLRFKMGGYRAVMPRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMSIPLDVKVPMLHEFHSYLYQPDWKYTESKEKDR
QVLEDFPTISMEFRKLSKVYQDVISDICHKMGVGMAEFLEKKVDSQHEWDKYCHYVAGLV
GIGLSRLFSASELEDSIVGQDTELANSMGLFLQKTNIIRDYLEDQMEGREFWPREVWSRY
VKKLSDLAKPENIDAAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNQQVFKGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKMPSTDPSCRRT
QQAIAAIRAASLPAGPMASRHHYSPIYLSCAMLLAALSWQYLSTLSKATEEYVQAGDN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgcggaaatggctgggccaccccgaggacatctacaacctgctccgcttc
aagatgggcggctaccgcgccgtcatgccgcggatggacacggactcgctgggatgtggc
ctccgaacctgctaccggtacctcaaccagaccagccgcagcttcgccgccgtcatccag
gctctggatggagagctgcgccatgcagtgtgtatattctacctggttctccgtgccctg
gacactgtagaggatgacatgagcatccctttggatgtcaaggtcccgatgctgcacgag
ttccactcctatctctaccagccagactggaagtacacagagagcaaggagaaggacagg
caggtgctggaagacttcccaacgatctccatggagttcagaaaactgtccaaagtctac
caggatgtgatttcagatatttgtcacaagatgggtgttgggatggcagagttcttggag
aaaaaggtggattctcagcatgagtgggacaagtattgtcactacgttgctgggctggtg
gggattggcctctcccgtctcttctctgcatcagagctggaagattccatcgtggggcag
gacacagagctggcaaactccatgggcctcttcctgcagaaaaccaacatcatccgtgac
tacctggaggaccagatggagggaagggagttctggcccagagaggtttggagcagatat
gtgaagaagctctcagaccttgccaagccagagaacatcgacgcggccgtgcagtgcctc
aatgagctcatcaccaacgccctccaccacgtccccgacgtcctcacctacctgtcccgc
ctcaaaaaccaaagtgtcttcaacttctgcgctatcccccaggtgatggccattgccacg
ctggctgcctgctacaacaaccagcaggtgttcaagggggtggtgaagatccgcaagggc
caggctgtcaccctcatgatggatgccaccaacatccaagctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatgccgagcacggacccctcgtgccgcaggacg
cagcaggcgatcgccgccatccgcgccgccagcctgcccgccggccccatggcctcccgc
caccactactcgcccatctacctgtcctgtgccatgctgctggctgccctgagctggcag
tacctcagcaccctctccaaggccaccgaggagtacgtgcaggcaggggacaactga
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