Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446310
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Entry
135446310 CDS
T09958
Symbol
PRDM13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135446310 (PRDM13)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
135446310 (PRDM13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-BED
zf-C2H2_7th_ZNF462
zf-C2H2_15
Zf-C2H2_ZNF451
DUF7128
PyrI_C
C2CH-3rd_BIRD-IDD
zf_MP81
Motif
Other DBs
NCBI-GeneID:
135446310
NCBI-ProteinID:
XP_064566154
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All DBs
Position
3:complement(2325300..2332324)
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AA seq
619 aa
AA seq
DB search
MQSSRAPAISVSAESCIPAGLRLGPVPGTFKLGKYLSDRKEPGPKKKVRMVRGELVDEAG
SSALEWIGLIRAARNSQEQTLEAVADLPGGQIFYRALRDVQPGEELTVWYSNPLAQWFDI
PVTATPTHDEKGEERYICWYCWRTFKYPNSLKAHVHFHCALSHGRPFLHHDHGRPAATAF
GLPPKELPAASLRGHPPPGCGPREPVKREAVVASPPLAKAALPKRAAGKEEQERALDMSV
GAARGPGPLLGPAGGNGLALCPGARSAFRPAGSLREEARGAAALGFSKLLGGLKAGRAAA
EAPPKCGALPGEAAPQAAAAGLACGGGLRAFPLLSPLEEASAFRQVERGLPAAALPPARY
PPLPGGALERFALPPFEGLKAYAGECGLPVMPLTVYNGELLYGAAPYYPLKLHLGGLLKY
PESVSYFAGPAAGLHAAELGSLASIDREIAMHTQQLSELAAEKGRGRLETLPAGAAGAAG
GKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDPSNLNKHIRLHAEG
NTPYRCEYCGKVLVRRRDLERHVKSRHPGQSLGKAAEDKSDSGYAQPEQEQKTDNESDVD
VCFTDDQSDAESGSRHREQ
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagcagggctccggccatcagcgtcagcgcggagagctgcatcccggccggg
ctgcgcctgggtcctgtgccgggcaccttcaaactgggcaagtacctgtcagaccgcaag
gagccaggacccaaaaaaaaggtgcggatggtcagaggggaattagtggatgaagccggg
agctcggctctggaatggatagggttaatccgagctgcccgaaactcccaagaacagaca
ctggaggctgttgcggatctgccaggaggacagattttctaccgggcgctgcgagatgtc
cagccgggagaggagctcaccgtctggtactccaaccctctggcgcagtggtttgacatc
cccgtcacggccacgccgacgcacgacgagaaaggggaggagaggtacatctgctggtac
tgctggaggaccttcaaataccccaacagcctcaaggcccacgtccacttccactgcgct
ctaagccacggccggcccttcctccatcacgaccacggccggcccgctgccaccgccttc
ggcctgccccccaaggagctgccggccgcctcgctgcgcggccacccgccgcccggctgc
ggccctcgggagcccgtcaagcgggaggccgtcgtcgcgtccccgccgctcgccaaggcg
gcgctgcccaagcgggcggcgggcaaggaggaacaggagcgcgccctggacatgagcgtg
ggggccgcccgcgggccggggccgctgctggggccggcgggcggcaacgggctggcgctg
tgccccggagcgcgctcggccttccgccccgccgggtcgctgcgggaagaggcgcggggc
gccgccgccctcggcttctccaaactgctggggggactgaaggcgggacgcgccgccgcc
gaggcgccgccgaagtgcggagcgctgccgggcgaggccgccccgcaggcggcggcggcg
gggctggcttgcggcggcgggctgcgagccttcccgctgctgtcgccgctggaggaggcc
tcggccttccggcaggtggagcgggggctgcccgcggccgcgctgccgcccgcccgctac
ccaccgctgcccggcggggccctggagcgcttcgcgctgccgcccttcgaggggctgaag
gcgtacgcgggggagtgcgggctgccggtgatgccgctcaccgtctacaacggggagctg
ctctacggggccgcgccctactacccgctgaagctgcacctcggcggcctcctgaagtac
cccgagtcggtgtcgtacttcgcggggccggcggcgggtctgcacgccgcagagctgggc
tcgctggccagcatcgaccgggagatcgccatgcacacgcagcagctctccgagctggcg
gccgagaaaggccgggggaggttggagacgctgccggcgggcgcggccggggcggccgga
gggaagcccaagaccgggcacctgtgcctgtactgcgggaagctgtactcccgcaagtac
gggctgaagattcacatgcggactcacaccggctacaagccgctcaagtgcaaggtctgc
ctgcggcccttcggggaccccagcaacctcaacaaacacatccgcctgcacgccgagggc
aacacgccctaccgctgcgaatactgcggcaaggtgctggtgcgacgccgcgacctggag
cggcacgtcaaatcccggcacccgggacagagcctcggcaaggcggccgaggacaagagt
gactctggctatgcgcagcccgagcaggagcaaaagactgataacgagagcgatgtggat
gtctgcttcaccgacgaccagagcgacgcggagagcggcagccggcaccgcgagcagtga
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