Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446425
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Entry
135446425 CDS
T09958
Symbol
SHROOM3
Name
(RefSeq) protein Shroom3 isoform X1
KO
K18625
protein Shroom
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135446425 (SHROOM3)
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
135446425 (SHROOM3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASD2
ASD1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
135446425
NCBI-ProteinID:
XP_064566215
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All DBs
Position
4:7778..117041
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AA seq
1999 aa
AA seq
DB search
MRMLDNINSSISPSECSITHKGRYIYLEALLHGGAPWGFTLKGGLEHGEPLIISKIEEGG
KADSLPSKLQAGDEVVNINEVELSSSRREAISLVKGSYKKLKLVVRRDTHAAQGCSELSP
SPDCVTTDLQPGKATWAAGVKLRLKTRRSETPGRPHSWHSSKLAENQPDPSMMQISQGTL
GTPWHQSYHSSSSTSDLSAYEHGYLRRSPDQYSSRGSMESLDHSSPAYHPCHLSPAKSTN
SIDQLSHLHSKRDSAYSSFSTNSSIPEYPAAPAGKEPSCSAVGLPEGMRQADIRYVRTVY
DAQQRISQEYEVKPSALLPGGDGRGHGRLHAFGRHNAASSWAQPAQGPSDSKSQPPLPPA
RSDSYAAIRHHERPGSGTGLEPSKPGRGQPKGAWAPLVSSLSQGPLLKPPFGEGHLHTVV
EKSPESSPTMKAKQSFSQAAQPGQPLLPTGVYAVPSPEPHYAQVPRPSAGSTGTLYPALA
KESGYSPALPASCDKAEAGGTLPLDENGNQSTTNRSTIFYQPPATERKHEAKLIQQKPPS
AAGPELGPAVSRKEELLPLYKAAHSHRETTGTTQTSRPLFQGPQPQPRDASERKNHYQPN
EDWTPGSQEEKNGNTQVNERDTGAAHPWGHSKAKQYGFSSLQNIPESSRRQSSSDLRETQ
PGEGYSSTRLSFLNSSSREEKDHREQGHRQWSDVDPQAFTRQEEDGTSMALFHAAEPKCK
EPPSPQLPKPSDFGRSRLSSSSTPSFPYSKPEAGKSRCSVLEKVNKFEQREQSAPRPQSA
GIPSFGQHYGPSRTSQPAGMRCSVHSPEDMRSKLPSEPGRGSSPSVRNGKLEEADWRPVE
LQMVAAVKQARPSEYYGLCPENEVQIRAPQLPRSRSTLQLGGEPEKEILWKDNIQDAHGS
QLDTSFNRAYRNSIKDAQSRVLRATSFRRISPPFGNAPKRVPQRPASAHVGMRSTAASPH
TPKERHSITPTEGGFSSLDHARTQQVLRIGGRKRLTAEQKKRSYSEPEKMNEVGISDGEP
SPFSFQKKSIHFIFPENTVADRRKIFERDGKASSTASLSKPELKQLQQNALADYIERKMG
RRPSSQDMGLLRERSHSSYLQLAGPDSQSLSSASSMNSLQDQNLYRRRESMERISRTGRM
SSTLPPGLMDCLDTSGDEKVPGRQDSLVTGRPKAERCWEHRPRSDLTKSTQTDLLGMQGQ
PRYRKQEQVFETPSTTRKSGKSVSVEDLLDRYDNQPVPVHVRSRSSPTADKKHQELLRRE
SSELGAVVRDPCYVLGAGARSFSKKERSHSEKMAFTSYYPHPLRSTELVAGPATLVESHK
LSELSRPDSRTSAFFPAPTEARSHYPEQKQGFKPLFLNLTPSGPGHSSPNTPGQAPADLQ
STGDSQAPRQHHAKREAAPPEGSGSTQAQPLDAAQDRSPETATEEMMWRRKAGLLHRSLP
PKAAWAHSAKDSGYARAVVSPPAAGPKPSQRWQSLPTQSSTSSDPESPAPQAVTQLRISE
SGLQLTPPPPLQDEEDDEVFVAPFSPPPPSRPLPELRSCTSANGTEELPPPAPPAEGNGA
AGDKSPWLPEEAGVSFKSFPKALAERETAGLGTSTSENNWPTPLKRTGSPSAVDQQHQSP
ASPEGPQSTDRQPITQPGGNSREPALENASLDSGITSTAPPVKAKSKTPEDIKSEALAKE
IVHKDKSLADILDPDSKMKTTMDLMEGIFPGGSSVLKENNMKRKMWQTQASRTAAAGDTR
EEREAPVTLVTCPAYYSVSAPKAELLNKIKDLPEEVGEEEELLDINEKKAELIGSLTHKL
EILKEAKEGLLEDIKMNNALGEEVELLISTLCKPNEFDKYKMFIGDLDKVVNLLLSLSGR
LARVENVLSSLGDSANSEERSSLNEKRKLLAGQHEDARELKENLDRRERLVLDILGNYLS
EEQLQDYQHFVKMKSALLIEQRELDDKIKLGQEQLKCLMESLPTDFTPRDAAAAAALAAA
LATSAGAGGKTPPAASSSL
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgctagacaacattaacagcagcatatccccttcagagtgcagcatcacccac
aagggaagatacatctacctggaggcactgctgcacggaggtgctccatggggattcacg
ctgaagggcgggctggagcacggagagccattaatcatctccaagattgaagagggaggg
aaggcagattccctgccttccaagctgcaggctggggatgaagtggtgaacatcaacgag
gtggagctgagcagctccaggagagaggccatctccctggtgaaaggctcctacaagaag
ctgaagcttgtcgtccgcagggacacccatgcagcacagggatgctcagagctgtctccc
agcccggactgcgtgaccactgacttgcagcccggcaaagccacgtgggcagcaggagtc
aagctacggctgaagaccaggcggagtgaaacgccgggccgacctcactcctggcattcc
agcaaactcgcggagaaccagcccgatcccagcatgatgcaaatatctcagggtacgctt
ggcaccccttggcatcagtcctaccactccagctcctccaccagcgatctctcggcgtac
gagcatggctacctgaggaggagccccgatcagtacagctcccggggcagcatggagagc
ctggaccactcctcccctgcctaccacccttgccacctgtccccggccaaatccaccaac
agcatcgaccagctctcccacctgcacagcaagagagactctgcctacagctccttctcc
accaactccagcatccccgagtaccctgcggccccggcgggcaaggagccctcgtgctcc
gcagtggggctgcccgagggcatgcggcaggccgacatccgctacgtccggacggtctac
gacgcccagcagcgcatctcgcaggagtacgaggtgaagccctcggccctgctccccggc
ggggacggccgcggccacggcaggctccacgccttcggccggcacaacgccgcctcctcc
tgggcgcagccggcgcagggcccctcggacagcaagagccagccgcccctgcctcccgct
cgcagcgacagctacgcggccatccggcaccacgagaggcccggctcgggcaccggcctt
gagcccagcaagcccggccggggccagcccaaaggggcctgggcgccgcttgtcagctcc
ctgtcgcaggggccgctgctgaagccgcccttcggagaagggcacctgcacaccgtggtg
gagaagagcccggagagcagccccaccatgaaggccaagcagagcttttcccaggcggcc
cagccagggcagcccctgctgcccaccggcgtctacgccgttccctccccggagccgcac
tacgcccaggtgccccggccttccgccggcagcaccggcacgctttacccagctctggcc
aaagaaagtggctactccccagccctcccggcctcctgcgacaaggccgaggccggcggc
accctgcccttggatgagaatggaaaccaaagcactacgaacaggtcgaccatcttctac
cagccccctgccactgagagaaagcacgaagccaaactcatccagcagaaacctcccagc
gcagcgggcccggagctcggcccggctgtgtcgcggaaggaggagctgctacccctttac
aaggcagcacacagccaccgagagaccaccggtaccacacagacctccaggccccttttc
cagggtccacaaccccagccgagggatgctagtgagaggaaaaaccattaccagcccaac
gaggactggacacctggatcccaggaggagaaaaatggtaacacacaggtaaacgagaga
gacactggtgctgcccacccatggggtcacagcaaggccaagcagtatggcttctcttcc
ttacagaacatcccagagagctccaggaggcaaagcagctctgacctaagggagacacaa
ccaggtgagggttattccagcaccagactgtccttcctgaacagcagcagcagagaggag
aaggatcacagagagcaggggcacagacagtggagtgatgtggacccccaggccttcacg
aggcaggaggaggacggcacgagcatggctctgttccatgctgctgagccaaagtgcaaa
gagcccccttctcctcagctcccaaagccctcagatttcgggaggagccggctcagctct
agcagcaccccgagctttccctacagcaaaccagaggctggcaagtcccgctgctcagtg
ctggagaaggtcaacaagtttgagcagcgggagcagagcgctccccggccccagagcgcc
ggcattcccagcttcggccagcactatgggccgagcaggacgagccagcctgctggcatg
aggtgctctgtgcacagcccagaggacatgagaagcaagctgcccagtgagccaggcagg
ggctccagcccctccgtcaggaacgggaagctggaagaggctgactggcgccccgtcgag
ctgcagatggtggctgcggtgaagcaggcaagacccagcgagtactacggcctgtgtcct
gagaacgaggtgcaaataagggcgcctcagcttcctcggagtaggagcacattgcagctg
ggaggcgagcctgagaaggagatcctctggaaggataacatccaggatgcgcacgggtcg
cagctggacacgtcgttcaatagggcctacaggaacagcatcaaagatgctcagtccagg
gtgctgagggccacctccttccggcggatcagccccccgttcgggaacgcgcccaagagg
gtgccccagaggcctgcctcggcccacgtgggcatgaggagcacggcggcgtccccgcac
acccccaaggagaggcacagcatcacgcccacggaaggaggcttctccagcctggaccac
gccaggacgcagcaggtgctgcgcatcgggggccggaagcggctgacggcggagcagaag
aagcgctcctactcggagcccgagaagatgaacgaggtgggcatctcggatggggagccg
tcccctttctccttccagaagaaaagcatccactttatcttcccagagaacacggtggcc
gaccggcgcaagatcttcgagagggacggcaaggcctcctccacagccagcctgtccaag
ccggagctcaagcagctccagcagaacgccctggccgactacatcgagcgcaaaatgggg
cgccggccgtcctcgcaggacatggggctgctccgggagcgctcccacagctcctacctg
cagctggctggccccgacagccagagcctttcctccgcctccagcatgaattccctccag
gaccagaacctgtaccgccgcagggagtccatggagcggatatccaggacgggacgcatg
tcttccacccttcctccggggctgatggactgcttggacacgagcggagatgagaaggtg
ccagggcgccaggacagcctggtcaccggccggcccaaagcagagaggtgctgggagcac
aggcccagatcggatctcaccaaaagcacgcagacagacctgctgggcatgcagggccag
ccccgctacaggaagcaggagcaggtctttgaaaccccctccaccaccaggaaatctggg
aaatcggtgtctgtggaagacttgctggataggtacgacaatcagccggtccccgtgcac
gtgcgctccaggtcgtctcccacggcggataagaaacaccaggagctgctgaggagggag
agcagtgagttgggcgccgtggtgagggatccctgctacgtgctcggcgcaggagccagg
tctttcagcaagaaagaaagaagccactcagagaaaatggcgttcaccagttactatccc
catcccctccgcagcacagagcttgtcgccgggcctgccacgctggttgagagtcacaag
ctctcagaactttccaggccagatagcaggacttctgcatttttcccagccccaacagag
gcaaggagtcactatcctgagcaaaaacaaggctttaaacccttgttccttaaccttact
ccttctgggcctggccactcttcccctaacacacccggccaggctcccgcagacttgcag
agcacaggtgacagccaggctccgagacagcaccatgccaaacgagaggctgctccccct
gagggcagcgggagcactcaggcacagcctctggatgctgcccaggacagatcccccgag
actgccacggaggagatgatgtggaggaggaaagcggggctgctgcacaggtccctcccg
cccaaagcagcgtgggctcattcggccaaagacagcggctacgccagggccgtggtgtct
cctccggcggccgggcccaagccctcccagaggtggcagtccctgcccacgcagagcagc
acttcctccgacccagagagccctgctccccaggccgtgacccagctccgcatctcggag
tcggggctgcagctcacgcccccgccgccgctgcaggacgaggaggacgacgaggtgttt
gtcgcgcccttctccccgccgccgccatcccgtcctctgcccgagctccgctcttgcact
tctgccaacggcacggaggaattgccgcctcctgcccctcctgctgaggggaacggggca
gctggagacaaatccccctggctcccagaggaggccggtgtgagcttcaaaagctttccc
aaagccctggctgagagggagaccgcagggttgggcaccagcaccagtgaaaataactgg
ccaaccccattaaagaggactggctctccatctgctgtggatcagcagcaccagtcccct
gcttctcctgaagggcctcagagcactgacagacagcccataactcagcctggaggtaac
tccagagagccagcattggaaaatgccagcctggactctgggataaccagcacagcaccc
ccagtgaaggcaaagagcaagaccccagaggatattaagtcagaggctctagcaaaagaa
attgtccataaagacaagtctctggctgatatcctggatccagattccaaaatgaaaact
accatggacttgatggaagggattttccccggtggaagcagcgtgctgaaggagaacaac
atgaagaggaagatgtggcagacacaggccagcaggacggcggcggcgggtgacacgaga
gaggaaagggaagctcctgtcaccctggtcacctgtcctgcttactacagcgtttcagca
cccaaagcagaactgctgaataaaatcaaggacttgccagaagaagtaggtgaggaagaa
gagctgctggacatcaatgagaaaaaggctgagctcatcgggagcttgacccacaaactg
gaaatcctgaaggaagccaaggagggcctgctggaggacattaagatgaataatgctctg
ggggaggaggtggagctgttgatcagcacgctgtgcaaacccaacgagtttgacaagtac
aagatgttcattggcgatctggataaggtggtgaacctcctgctctcgctctcgggacgc
ctggcccgcgtggagaacgtcctgagcagcctgggggacagcgccaacagcgaggagcgg
agttccctgaacgagaagcggaagctgctggctggccagcacgaagacgcccgggagctc
aaggaaaacctcgaccgtcgggaacggctggtcctggacatcctgggcaattacctctct
gaggagcagctccaggactaccagcactttgtcaagatgaagtctgcgctcctcatagag
cagcgggagctcgacgacaaaatcaaactgggccaggagcagctcaagtgcctgatggaa
agtctccccacggacttcacacccagggatgcagcagcagcagctgccctggctgctgca
cttgctacctccgccggggccggtggtaaaacacctccagcagcctcttcctcgctctaa
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