Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446528
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Entry
135446528 CDS
T09958
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04010
MAPK signaling pathway
zle04020
Calcium signaling pathway
zle04144
Endocytosis
zle04510
Focal adhesion
zle04540
Gap junction
zle04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135446528 (PDGFRA)
04020 Calcium signaling pathway
135446528 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135446528 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
135446528 (PDGFRA)
04540 Gap junction
135446528 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
135446528 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zle01001
]
135446528 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
zle04090
]
135446528 (PDGFRA)
Enzymes [BR:
zle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
135446528 (PDGFRA)
Protein kinases [BR:
zle01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
135446528 (PDGFRA)
CD molecules [BR:
zle04090
]
Proteins
135446528 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Adeno_E3_CR1
Kinase-like
Motif
Other DBs
NCBI-GeneID:
135446528
NCBI-ProteinID:
XP_064566462
LinkDB
All DBs
Position
4:8638361..8672782
Genome browser
AA seq
1087 aa
AA seq
DB search
MGTYPQAFLILGCFLTGPFLTFCQLPLPTIVPNRNEMVVQLYSNFTLKCSGDSEVSWQYP
VTEGNHRIDIRHEENNSGLFVTVLEVGNASAAHTGLYVCYYNHTQVEDGDVEGKDIYIYV
PDPDMPFVPSIPEDQFILVEEGDPAVIPCRTSNPEAQVTLVNSLDKPVHALYDAKQGFIG
NFPAGSYTCKTMVKGVEFKSDEFLIYIIKATSQLPVEIEALKTVYKAGESIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVAITVHDKGFVHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDNVTLIENL
TEIVTTSGRVQETRFQSVLKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQVPALISAL
VDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKKCNNDTSWTLLTNNISDIHMEAHLDE
KNMVESRVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLNRHPEKPKKDLDIFGMNPADESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSMSESEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDSDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttacccacaggcgttcctgatcctgggatgttttctcacaggaccattccta
acattttgccagcttcctctgccaactattgttcccaataggaatgaaatggtggtacag
ctctattccaatttcacactcaaatgctctggggacagtgaagtgagctggcagtaccca
gtgaccgaggggaaccacaggatagacatcagacacgaagagaacaacagcggcctcttc
gtgacagtgctcgaggtggggaacgcctcggccgcgcacacgggcctgtatgtctgctac
tacaatcacacacaggtggaggacggcgacgtggaaggcaaggacatctacatctatgtg
cctgacccagacatgccttttgttccttctatacccgaagaccagttcatcctggtagaa
gaaggcgatcctgcagttatcccttgtcggacaagcaacccagaggcccaagtgacttta
gttaacagcttagacaagcctgtgcatgctttatatgacgccaaacaaggcttcataggg
aattttcctgcgggctcatacacgtgcaaaacaatggttaaaggtgtggagttcaagtct
gatgagttcctcatctatattataaaagctacttcacagctgcctgttgaaattgaagct
cttaaaactgtctacaaagcaggcgagagcatcgtagtaacttgtgtggtctttgacaat
gaggtggtgaatttacagtggaattaccctgggaaagtgaaagaaaaaggtctgataaag
cttgatgatatcaaagtgccatcacagaagctggtttacaccttgaccattcctgaggca
tcagtgaaagacacaggggattatgaatgtactgctcggcatgcaaccaaggaggttaag
gaaaataagaaagtagccattacagttcatgacaaaggctttgttcacctggagcctcag
ttcagccctctggaagctgtcaacctgcatgaagtcaaaaactttgttgttgatgtgcag
gcttacccagcaccaaaaatgtactggttgaaggataacgtgactctgattgaaaatctt
acagagattgttactacttcaggaagagtccaggaaacaaggtttcagagtgttttaaaa
ttgatacgggccaaggaggaagacagtggatactatactttggttgctgaaaatgaagat
gagattaaaagatacaccttctcattgctgatacaagttccagctctgatctcagccctc
gtggatgatcaccatggctctgcaggtggccagactgtgagatgcttggcagaggggacc
ccacttcccgatgtggaatggctggtttgcaaggacattaaaaagtgcaacaatgacacc
tcatggacccttttgactaacaatatctctgatatacacatggaagcccacctggatgag
aaaaatatggtggaaagccgggtgaccttccagaaggtggaggaaaccctggctgtgcga
tgtgtggcaaggaacgaccttggtgccgttactcgagagctgaagcttgtggctcccacc
ttgagatcagagctaactgtggctgctgctgtcttagtgctgttggtgattgtgataatt
tcactgattgtcctggttatcatatggaaacagaagcccaggtatgagatcagatggaga
gtcattgagtccatcagccctgatggccacgagtacatttatgtggacccaatgcaactg
ccttatgactccagatgggagtttcctcgagatgggttagtgcttggtcggatccttggt
tcgggtgcatttggaaaagtggttgaagggactgcatatggattgagccgctcccaaccg
gtgatgaaagtagctgtgaaaatgctgaaacctacagctagatccagtgaaaaacaggca
ctcatgtctgaattgaagataatgacacatcttggcccccacctgaatattgtgaatctg
cttggagcttgtacaaaatcaggtcctatttacatcattactgaatactgtttttatggc
gatctggtgaactacctgcataagaatagggacaatttcctgaaccgacaccctgaaaag
cccaaaaaagacttggatatctttgggatgaaccccgctgatgaaagcacaagaagttat
gtgatactatcgtttgaaaacactggagaatacatggacatgaaacaagctgataccact
cagtatgtgccaatgctggaaaggaaggagggctctaaatactctgatattcagagatct
gtgtatgatcggcctgcttcctataagaagaaatccatgtcagaatcagaagtcaaaaac
cttctttcagatgacagttcagagggcctcagcctattggatttgttgagcttcacctac
caggttgcacggggaatggaattcttggcttctaaaaattgtgtgcaccgtgacttggcc
gctcgtaatgtcctcctggctcaaggaaaaattgtgaagatctgtgactttgggctggct
agagacatcatgcatgattccaactatgtctccaagggcagtactttcctcccagtaaaa
tggatggcacctgaaagtatttttgacaacctgtacacgacattaagtgatgtctggtct
tatggcattctgctgtgggaaatattttctcttggtggcacaccttatcctggcatgatg
gttgattctactttctacaataagatcaagagtggataccgaatggccaaacctgatcat
gccaccaatgaagtgtatgagattatggtgaagtgctggaacagtgaaccagagaaaaga
ccttctttctaccatttgagtgaaattgtggagagcttgctgcctggagagtacaaaaag
agctatgagaagattcatctggacttcctgaaaagtgatcacccagctgtcacacgcatg
agaggggactctgacaatgcttacattggtgtaacttacaagaatgaagacaagctaaag
gacagggagagtggatttgacgagcagaggctgagtgctgacagtggatacatcattccc
ctgcctgacattgaccctgtttctgaagatgagcttggcaaaaggaacagacacagttca
cagacatctgaagaaagtgccattgaaaccggttccagtagctccaccttcatcaagaga
gaggacgagaccattgaggacattgacatgatggacgacattggcatcgactcctcagac
ctggtggaggacagcttcctgtaa
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