Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446696
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Entry
135446696 CDS
T09958
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04010
MAPK signaling pathway
zle04210
Apoptosis
zle04218
Cellular senescence
zle04620
Toll-like receptor signaling pathway
zle04621
NOD-like receptor signaling pathway
zle04622
RIG-I-like receptor signaling pathway
zle04623
Cytosolic DNA-sensing pathway
zle04625
C-type lectin receptor signaling pathway
zle04920
Adipocytokine signaling pathway
zle05132
Salmonella infection
zle05164
Influenza A
zle05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135446696 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
135446696 (NFKB1)
04218 Cellular senescence
135446696 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135446696 (NFKB1)
04621 NOD-like receptor signaling pathway
135446696 (NFKB1)
04622 RIG-I-like receptor signaling pathway
135446696 (NFKB1)
04623 Cytosolic DNA-sensing pathway
135446696 (NFKB1)
04625 C-type lectin receptor signaling pathway
135446696 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
135446696 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135446696 (NFKB1)
05168 Herpes simplex virus 1 infection
135446696 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
135446696 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135446696 (NFKB1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
135446696 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
135446696
NCBI-ProteinID:
XP_064566957
LinkDB
All DBs
Position
4:26436171..26493962
Genome browser
AA seq
981 aa
AA seq
DB search
MAAEDSYIMGVNDPQMFAVDQFMGMNALFNSTNYITADLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVLAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
SYLQAEGCEDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGAGGGAGSGFSFPSYGYSAFGGMHFPGA
TKSSAGMKHEGLSNCTAEQDRKSCDKQNDQWGMKCDVKMEAVESSECRTSAVHEKKEDSV
FSCKTEVSEADCRWQDALFLEKALQLARRHCNALFDYAVTGDVKMLLAAQRHLTAVQDDN
GDNVLHLAIIHLHTELVKNLLEVMPRLNYNDIINMRNDLYQTPLHLAVITKQAKVVEDLL
KAGADVSLLDRHGNSVLHLAATEGDDKILSLLLRHEKVSPMVNLPNAEGLSAIHMVVTAN
SMSCLKQLIAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDYVKDEDDDEGIVPGTTPLDMAATSE
VYDILNGKPYESAEVLEDLLTQGHLRELNENSKMQLYKLLELPDPTKNWSTLAQKLGLGI
LNNAFRLSPSPSKTLLDNYEVSGGTVQELIAALRQMDHTEAIEIIQEALSISRRPPPLED
STAKALPLSSPLTFANGETGELYNSRFQDPESVCDSGVETSFRKLSFTYSDSLSSKSSLT
LGKMALGCGHQSSGQSNYIAD
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaagattcctatattatgggagtaaatgatccccaaatgtttgcagtggat
cagttcatgggaatgaatgctttatttaacagtaccaattacatcactgcagacttacca
ctacgaacagcagatggaccatatcttcaaatcatagaacagccaaaacagaggggattt
cgtttccgatacgtgtgtgaaggaccttcgcacggtggacttcctggtgcttctagtgaa
aagaacaaaaaatcataccctcaggtcaaaatctgcaattatgttggacctgcaaaagta
attgtccagttagtaactaacgggaaatatgtccacttgcacgctcacagcctggtgggt
aaattctgtgaagacggagtgtgcacggttcttgcaggacccaaggacatggtggtgggg
tttgcaaatcttggaatccttcatgtcacgaagaagaaagtgtttgaaactctggaaaca
cgcatgatagatgcttgcaagaagggatacaacccaggactcctggtgcatccagaactc
agctatcttcaggcagaaggctgtgaagacaggcagctaactgaacgggagagggaaatc
atccgccaggcagccatccagcagaccaaggagatggatctcagcgtggtgcggctcatg
ttcacggccttccttcccgacagcaacggcagcttcacgcgcaagctggatcccgtcata
tccgacgcaatatatgacagcaaagctcccaatgcctccaacctaaaaattgtaagaatg
gacagaacagcagggtgtgtgacaggaggggaagagatttacctgctctgtgacaaggtt
cagaaagatgatattcagatacgtttctatgaagaggatgagaatggtggtatgtgggaa
ggctttggagatttctctcctacagatgtacatagacagtttgctattgtgttcaaaaca
cccaaataccgagatgtcaatatcacaaagccagcatctgtatttgtacaactgcgtagg
aaatctgatctagaaacaagtgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcaaaggaaacggcagaagctcatgcccaacttctccgatggctatggt
gggggcagtggcactggaggtggtggcatgtatggaggggcaggtggtggtgctggctct
gggttcagttttccttcatatggatactctgcttttggagggatgcatttccctggcgca
acaaagtccagtgctggcatgaaacatgaaggtctatcaaattgcacagctgaacaagac
agaaagagctgtgataaacaaaatgaccaatggggcatgaaatgtgatgtgaagatggaa
gctgtggagagcagtgagtgcagaacatctgctgttcatgagaaaaaggaggattctgtt
ttttcctgtaagactgaagtgagcgaagcagattgcaggtggcaggatgccctgttcctg
gagaaggccctgcagcttgccaggcgccattgcaatgctctcttcgattacgccgtaacc
ggagacgtgaagatgctgctggctgctcagcgccatctcaccgctgtccaggatgacaat
ggggacaatgtccttcatttagcaattatccaccttcatactgagctggtgaaaaacctc
ttggaagtgatgccccgtttgaattacaatgacatcattaacatgagaaatgacctctat
cagacccccctgcacctggcagtaatcacaaagcaggcaaaggtggtggaagacttgctg
aaggctggagcagatgtcagccttctggatcgccatggcaattctgtcttacatttagct
gctactgaaggagatgacaagattttgagtctactcctcaggcatgagaaggtatctccc
atggtcaacctccccaatgctgaaggtctcagtgcaattcacatggtggtgacagcaaat
agcatgtcctgcctcaaacagctgattgctgccggagttaacgtcaatgctcaggaacaa
aaatctggacgaactgcattgcatttggctgttgaacaagagaacatccccttggcaggc
tgccttttgcttgagggtgatgcagatgtggacagcacaacatatgatgggacaactcca
cttcacatagcagctggaaggggctccacaaaattggcagcagttctcaaagcagcaggt
gccaatcctcacattgagaactttgagccattgtttgatctagactatgtgaaagatgaa
gatgatgatgaagggattgtgcctggaacaacaccattggatatggcagccacgtctgag
gtgtatgacatattaaatggcaaaccctacgagtcagcagaggttctggaggacttactc
acacaaggacacttgagagagctgaatgagaattccaagatgcagctttacaaactattg
gaattgcctgatccaaccaaaaactggtccaccctagcacaaaaactgggtcttggcata
cttaataatgccttcaggttgagcccttccccatcgaagaccctgctggataactatgag
gtgtctggtggtacagttcaagagctgatcgctgctttgagacagatggatcacacagaa
gccatagaaataattcaggaagcactgtccatctcacgcagaccgcctcccctggaggac
agcacagcaaaagctcttccattatcatcaccactcacctttgcaaatggagagacaggt
gagctctacaacagcagattccaagaccctgaaagtgtgtgtgacagtggtgtggagacc
tccttccgcaagctgagcttcacctactcagactctctgagcagcaagtcctcactaaca
cttggcaaaatggccctgggctgtggacatcaaagctcagggcaaagcaattacatagct
gactag
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