Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446730
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Entry
135446730 CDS
T09958
Symbol
SEC24B
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135446730 (SEC24B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135446730 (SEC24B)
Membrane trafficking [BR:
zle04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
135446730 (SEC24B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
135446730
NCBI-ProteinID:
XP_064567017
LinkDB
All DBs
Position
4:28725133..28773230
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AA seq
1233 aa
AA seq
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MSAPAGLPPRPAAAAAAFPPGGPGSSLEAAAPASGAPRCQNGPMQSQMQFPSGYGSHLPN
YSAPSGHYSQVPNKAAASHLENQYRASYYPGYYSAPAPNAMAPVGSSVLNAQESHQLYNN
APPHSGGSSDRPVQGAVSSASYLHVSAQQSYSAFDNHYSTSVSSSVASQGFPLNSDHYAM
PVVSGAMYPNVSYPPVAAGGVYGQTFTSQSLPAVGQFKETNAFSSQSTSVPHSLQQHVPV
GYNTTLSTVSSAQAVQDNLSRNLTGSVPKVNNQIHTGGIDSSQPVHSVSQNVPFSKPGAG
TSAASAAMSSVRSPAPSLSSKAPSSPSAAQSPELPLQEGMQYGGYVNNQASSAPAPLSSS
SDDEEEDEEDEEAALDSSSTTSSASPVLNNYDALEGGGYPETRSVTSSPVPSPSVLQTSK
ASKPFGYGYPALQPGYQNATPPTPVQPSNPGHHSGFQHYAQQYPGVNQLSSSLGGLSLQH
SQQPESLRPVNLTHDRNILPVSSVPAPVPNLNSDLRKLNCSPDSFRCTLTNIPQTQALLN
KAKLPLGLLLHPFRDLTQLPVITSSTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDV
PEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGY
LTILCQSLLENLDKLPGDSRTRIGFITFDSTVQFYNLQEGLSQPQMLIVSDIDDIFLPTP
DSLLVNLHESKELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPTGGRISVFQTQL
PSLGAGLLHSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLA
SLACMSKYSAGCIYYYPSFHRSHNPAQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSIH
TFHGNFFVRSTDLLSLANVNPDAGFAVQMSIEESLTDTSLVCFQTALLYTSSKGERRIRV
HTLCLPVVSSLADVYAGADVQAVVCLLANMAVDRSVSSSLADARDALVNAVVDSLAAYMS
TASNLQQSMLIAPNSLKLFPLYILALLKQKAFRTGTSTRLDDRVYAMCQMKSQPLVHLMK
MIHPNLYRIDKLTDESTIHVNDRVVPQPPLQKLSAEKLTREGAFLMDCGSIFYLWIGKNC
DNNFIKDVLGYPNYASVPQKMTQLPEVDAPSSERTRSFISWLRDSRPLSPVLQVIKDENP
AKTDFFQHLIEDRTEAAFSYYEFLLNIQQQICK
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcccgccgggctgccgccgcggcccgcagccgccgccgccgcgtttcccccg
ggcgggcccggcagctccctggaggccgcggcccctgcgagcggcgcgccgcgctgccag
aacggtcctatgcagagtcagatgcagttcccctctggctatggctcacatcttccaaac
tacagtgcgccttcaggacactattcccaagtgcccaataaagctgctgcttcacatctg
gagaatcagtacagagccagttactaccctggttactactcagcaccagcaccaaacgct
atggcacctgtgggcagcagcgtgttgaatgcacaggagtcacatcagctgtacaacaac
gctcctccccattctgggggctccagtgacagacctgttcaaggagcagtgtcgtctgca
tcctacttgcatgtgagtgctcagcagtcatattcagcatttgataatcactacagcacc
tctgtcagctcttcagttgcatctcagggatttccccttaattctgatcactacgctatg
cccgtggtttctggtgccatgtatcctaatgtttcctatcctcccgtggctgctggaggt
gtgtatgggcagacatttacctctcagagtctacctgctgttggacagttcaaagagaca
aatgcgttttctagccagagtacatcagtacctcattcccttcagcagcacgttcctgtg
ggatacaatacaacattatcaactgtttcatctgctcaggctgtgcaagacaacctcagc
aggaatctcactggatctgttcctaaagtaaacaaccaaatacatacaggtggcattgat
tcttcacagcccgtgcactcagtgagccagaatgttccatttagcaagcctggagctgga
acatctgctgcctctgctgcgatgtcgtcagtacggtcacctgctccaagcctgtcttca
aaggcaccatcttcaccctctgctgcacagtcaccagagctgccccttcaggaaggcatg
cagtatggtggatatgttaataatcaagctagctctgcaccagctcccttgtcatcaagt
tcagatgatgaggaagaggatgaggaggatgaggaagcagcacttgatagttcctctact
acaagcagtgcctctcctgttcttaacaattatgatgctctggaaggaggtggctatcca
gagacacgttctgtgactagcagcccagttccctctccatcagtcctgcaaacatcaaaa
gcttctaagccctttggttatggatatccagcactgcagccaggctaccaaaatgcaaca
ccacctactcctgtgcagcccagtaatccaggacaccattctggttttcagcactatgca
cagcaatatccaggtgtgaaccagctgtcctcttccttaggaggattaagtctacagcat
tctcagcagccagaaagcttgagaccagtaaaccttacacacgatagaaatattttaccg
gtgtcttcagttccagcacccgtgcctaacttgaattctgatcttaggaaattaaactgc
agtccagactcatttcgatgtacattgacaaatattccacagacacaggctttgttaaac
aaagctaaacttcctttgggtttgttgctgcatcccttcagggacctgacgcaattgcca
gtaataacatcaagcacaatagtgagatgcagatcctgcaggacttatatcaaccctttt
gtttctttcattgatcagaggcggtggaaatgcaacctgtgctatagagttaatgatgtt
cctgaagaatttatgtataatcctctgacacggtcttatggagagcctcacaagcggcca
gaggtgcaaaattctacagtggaattcattgcttcttcagactatatgcttcgtcctcct
cagcctgcggtatatttatttgttttagatgtgtctcataatgcagtggaggctggatat
ttgacaatactctgccagtcattgctggaaaacctagacaagctgcctggagattcaaga
acaagaataggattcataacatttgacagcactgttcagttttacaacttacaagaaggt
ttatcacagcctcagatgctgattgtctcagatattgatgatattttcttacctacacca
gatagtttacttgtaaatctccatgaaagcaaagagctgataaaagatctattgaatgca
ttaccaaacatgttcaccaatacaagagagacgcacagtgcactgggccctgcccttcag
gctgcatttaagctgatgtctccaacgggtggtcggatctctgtgtttcaaactcagtta
ccaagtttgggagcagggcttctgcattccagagaggatcccaatcaaaggtcaagcaca
aaggtggtccagcatcttggtccagcaacagatttttataagaagttggcactggactgc
tctggccagcagactgctgtggatttatttctcttaagttcacaatattctgatctagct
tctcttgcttgcatgtccaaatattctgctggatgcatctattactatccatctttccat
cgtagccataatcctgctcaggctgaaaagttgcaaaaggacctgaaaagataccttaca
agaaagattggatttgaagcagttatgcgcataagatgtacaaaaggtctttcaatacac
actttccatgggaatttttttgtacgatctactgatttactgtcccttgccaatgtcaat
cctgatgctggttttgcagtacaaatgtctatagaggaaagtctgactgacacatctttg
gtttgttttcaaacagcacttttgtatacttccagtaaaggtgagcgtcgaattcgagtg
cacacactttgcttgcccgtagtgagttccctggctgatgtgtatgcaggagcagatgta
caggcagttgtgtgcctcttagcaaacatggctgtggatcgctcagtctcatccagcctt
gcagatgcaagagatgccttagtcaatgccgtggtggactccttggcagcgtacatgtca
actgcctcaaatctgcagcagtccatgctgatagcaccaaattccctcaagcttttccca
ctctatattttagctcttctcaaacagaaagccttcagaacaggcaccagtacccgcttg
gatgatcgtgtctatgcaatgtgccagatgaagagccagccccttgttcatttgatgaag
atgattcatcccaacttgtacagaatagacaagctgactgatgagagtacaatacatgta
aatgacagagttgttcctcagccaccccttcagaagttgtctgcagagaagttgacaaga
gaaggagcttttcttatggattgtggttcaattttttacctttggattggaaaaaactgt
gataacaacttcataaaagatgtccttggatacccgaattatgcatcagtgccacagaaa
atgacacagcttcctgaggtggatgcaccttcttcagaaaggacacgatcttttatatct
tggcttagagatagtagacctttaagtccagttcttcaagtaataaaagatgagaaccct
gccaaaacagatttttttcagcatttaattgaggatcggacagaagcagctttctcgtat
tatgaattcctacttaatattcaacagcagatttgtaagtga
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