Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446816
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Entry
135446816 CDS
T09958
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1
KO
K15184
AF4/FMR2 family member 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135446816 (AFF1)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
135446816 (AFF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
DUF484
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
135446816
NCBI-ProteinID:
XP_064567265
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All DBs
Position
4:38127967..38204493
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AA seq
1223 aa
AA seq
DB search
MAAQSSLCNEDRNLLRIREKERRSQEVLEDKKQFSEKTPLFAEPYKTNKGDELSSRIQNM
LGNYEEVKEFMTNKSCQNLIGIPKSVAPQFAPGPPEKAIRTLPSSFQHLTRRPPVGPMVV
PPRPPSHSSHYPKAQPGTEPALGLHSKSRSSASARSHGPEHGRGGRDAQAGFPHSHHGRP
GSGEGRAHGLQASPLALSPFLPCLLSSPVAPLSPLHSSQHINSRSQNSSKSHGSTYNQTK
SLQDLVTGSQEKESRDSPAVTLTSTTQPSSQTFPPSLTSKASAMQQKPTAYVRPMDGQDQ
ASFESLELKPLLEEYHEGSNDDVSDLKAKVKAELSKLETLSEPKEETDEDLSDLKAKAKV
ELSKFETPSEPIEQTNPIDVQSIEEILREMTRSWPPPLTALNTPTKAEPSKFPFPTKELQ
PEGSVAKDQKQYGAPSETLPGSQPRTSMLQDDLQLSDSEESGDDQVVEKSPSSLAPPSSL
QSQPKSVASAHSSSSESGSTSDSDSSSDSETESPSSDSDTSEPPRAPAPEPEPPTSNKWQ
LDNWLTKVNPAAVPAESPRDTARGDGPEEGRGQQRGSSSNSCQQHPELRQPPHKSPAARA
PQEAPLPTKGSCQKAPARSQEPSARHTVGIKGPSKPLGHEGPRRGLKVESEPGPLELTDQ
SFRDKPKVKKTVKTKSNDRKDPKPGLQEPSERKKDKGSHQAKAKPFLEPRLMGDAQARDA
LSPLPQGTAPLRTSRHRPQDLHREKLSLSLGEKLLSPVRDPPSREHLVVKIDLCHLEKVP
QPPRKNGHQRKAETKDLPDVRKQDLKRKATDTPEESLAKKKREEKEETDRKKMKSEKKPK
SLQSSANKDSSKLKASKASCEIQKKDVLPPLPSMSAAQPAPKSAKMTQKRPRNETDELPA
MDNPAKSKSNHKDPSFAKRRKVEGNPTELSKGIKGSAGDVTKPFPVPSMPNGTSKPRRPL
LKFEKQHSKEYYIEQAQRLKHRADAMTDKTGKAFHYLEAALLFIEYGIALESDVLEPKSA
YSILSDTIVLIKFIMTLKPFADSSVSSHGKIFAVLRMRCQSILHMAMFGYKKDTAMRYSR
LLNDHFKSNFRVIQAPSPGVARSTGLPSPLSPIPSPAGSVSSQPGSNDSNGVGHSSIGNS
AGSTVTVSCHISSVTSSYVNITSYILHAYEIWEKADALARKNKEFFAELSRATSALALTS
SLTDLVHYIRQGLQWLRLEANMP
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccagtcgagcttgtgcaatgaagacagaaatttgctgcgcattcgagagaaa
gagagacggagtcaggaggttctggaagacaaaaaacagttttctgagaaaactcccctc
tttgcagaaccctacaagactaataaaggagatgagttgtctagccgaattcagaacatg
ctgggcaattatgaggaggtcaaggagttcatgaccaacaaatcttgtcaaaaccttatt
gggattccaaagagcgttgcccctcagtttgcccccgggccgcctgagaaggccatccgt
acactgccatcttcattccagcacctgacccgccgtccacccgtgggacccatggttgta
ccccctcgccctccaagccactccagccactacccaaaggcacagccaggaacagagcca
gctttgggtttgcacagcaagagccgcagctcggccagcgctcgcagccacggccccgag
cacggccgcgggggccgggacgcgcaggcaggctttccccacagccaccatggcaggcct
ggcagcggggaaggtcgggctcatggcctgcaggcctcccctctggcgctttcccccttc
ctgccatgtttgttgtcttctcccgtggcacccctgtcacctctacattccagccagcat
atcaattccaggtcacagaacagcagcaaaagtcatgggtcaacctacaatcaaaccaaa
tcattacaggacttggtgacgggatcacaggagaaggaaagtcgggacagcccagccgtt
accttgaccagcaccactcagccttcctctcagacttttcccccttctttgacatcaaaa
gccagtgcaatgcagcagaaaccaactgcctatgtcagacccatggatggccaagatcag
gcatcatttgaatccctggagctcaaacctctcctggaggaataccatgaaggatccaat
gacgatgtctcggatttgaaggccaaagttaaagctgagctatccaagctggaaaccctc
tctgagcccaaggaagagactgatgaagatctgtcagatttgaaggcaaaagccaaagta
gaactatccaaattcgaaaccccttctgagcccatagagcaaaccaaccccattgatgtg
cagtccattgaagaaattttgagggaaatgacccgctcttggccacctcccctgacagct
cttaacacacctactaaagcagagccttcaaaatttccattccctacaaaggaattgcaa
cctgaaggatctgtagcaaaggatcagaagcagtatggagcaccttcagaaacgttgcca
ggttctcagccaagaacatcaatgctccaggacgacctgcagctcagtgatagtgaagag
agtggtgacgaccaagttgttgaaaagtcaccttcttcacttgctcctccaagttcctta
cagtcccagcccaagagcgtggcatcagcacattccagcagctcggagtcagggagcacc
agtgactcagacagctcctccgactcggagacagagagcccctcgagtgacagtgacacc
agcgagcccccgcgagcgccggcacccgagcccgagccaccaacttctaataagtggcag
ctggacaactggctgaccaaggtgaacccagcagcagtgccagcagagagccccagggac
actgcccgaggggatgggcctgaggagggcagggggcagcagcggggcagcagcagcaat
tcctgccagcagcaccctgagctgaggcagcctcctcacaagagcccagcggccagggct
cctcaggaggctcctctcccgaccaaaggcagctgccagaaggctcctgcgcgctcccag
gagccctcggccaggcacaccgtggggatcaaagggcccagcaagcccctggggcacgag
gggcccaggaggggcctgaaggtggagagtgagcctggccctttggagctcacagaccag
tctttcagggacaagccaaaagtcaaaaaaacagtgaagacaaaatccaatgacagaaaa
gacccaaaaccgggacttcaagagccctctgagagaaaaaaggacaagggctcccaccag
gccaaagccaaacctttcttggagcccaggctcatgggagatgcccaggcacgggatgct
ctcagtccccttcctcagggcacagcccccctcaggaccagcaggcacaggcctcaggat
ttgcacagggagaagttgtccttgtctctcggggagaagttgctctcaccagtgagggat
cccccaagccgtgagcacctcgtggtgaaaatagatctctgccacctggaaaaagtccct
cagccccccaggaaaaatgggcaccagaggaaagcagagaccaaggaccttcctgatgtg
aggaagcaggacttgaagaggaaagccacggacactcctgaggagtcccttgcaaagaag
aagagggaagagaaggaggagactgataggaagaaaatgaaatctgaaaaaaaacccaaa
tcattgcagtcttcagctaacaaagactccagtaaattgaaagcatcaaaagcttcttgt
gaaatccagaagaaagatgtgctcccaccactgccatccatgtctgctgcacaacctgcc
ccaaagtcagccaagatgacccagaagagacccagaaatgagactgatgagctgcctgcc
atggataaccctgccaagagcaagagcaaccacaaggatccttcgtttgccaagcgcagg
aaagtggagggaaatcctacggaactgtccaagggcatcaaaggatctgcaggtgatgtc
acaaagcctttcccagtgccttctatgccaaatggtacctctaagccaaggagacctctg
ctcaagtttgaaaagcaacattcaaaggaatactacattgaacaggcccagaggctgaag
cacagagctgatgcaatgactgacaagactggaaaggcctttcactacctggaggctgcc
cttttattcattgaatatgggattgccttggaatcagatgtgctggaaccaaaatcagct
tacagcatactcagtgacaccatagttctcatcaaattcatcatgactttgaaaccattt
gcagactcctcagtctcttcacacggaaaaatctttgctgtgttacgcatgcgctgccag
tccattctgcacatggcaatgtttggttacaaaaaggacactgcaatgaggtattccaga
ctcctgaatgaccacttcaagagtaatttcagagtaatacaagcaccttctccaggtgtt
gcaagaagcacaggcttgccttctcctctttctccaataccctctcctgctggatctgtg
agttctcagccaggatcaaatgatagcaacggcgttggccacagcagcattggcaacagc
gctggctctactgtcactgtctcctgtcatatctccagtgtcacctcttcctatgtcaac
atcacctcctatatcctccatgcatatgaaatttgggaaaaggctgatgcactggccagg
aagaataaagagttttttgctgaactcagcagagcgacgagtgccctggcactgaccagc
agcctgacagacctggtacactacatcagacagggattacagtggctgagactggaagca
aatatgccttaa
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integrated database retrieval system
