Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446823
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Entry
135446823 CDS
T09958
Symbol
SMAD1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04081
Hormone signaling
zle04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135446823 (SMAD1)
09133 Signaling molecules and interaction
04081 Hormone signaling
135446823 (SMAD1)
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Gene cluster
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Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
135446823
NCBI-ProteinID:
XP_064567285
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Position
4:38635691..38679442
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AA seq
465 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEV
CINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPHNATFPDSFQQPS
SHPFPHSPSSSYPNSPGSSSSTYPHSPASSDPGSPFQMPADTPPPTYLPPEDPMTHDTSQ
PMDTNMMAPAIPPDVHRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSILVDGFT
DPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTLRMSFVKGW
GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaacaagtttattctccttcaccagcccagcagtgaagaggctgttggggtgg
aagcaaggggacgaagaagagaagtgggcagagaaagctgttgatgcattagtgaaaaaa
ctgaaaaagaagaaaggtgctatggaggagctggagaaagccctgagctgtcctggccag
cccagcaactgtgtgacaatccctcgttccctggatggccggctccaggtgtcacacagg
aaggggctcccgcacgtcatctactgcagagtgtggcgctggcccgacctgcagagccac
cacgaactgaaacctctggaatgctgcgagttcccctttgggtcaaagcagaaggaggtt
tgcatcaatccctaccactacaagcgggtggaaagtcctgttcttcctccggtgctggtg
ccgaggcacagcgagtacaacccccagcacagcctcctggcgcagttccgcaacctgggg
cagaacgagccccacatgccgcacaacgccaccttcccggactccttccagcagcccagc
agccaccccttcccccactcgcccagcagcagctaccccaactcacctgggagcagcagc
agcacctacccccattctccagccagctcagacccgggcagccctttccagatgccagct
gatactcccccgcccacttacctgcctccggaagatccgatgacacacgatacctcgcag
cccatggataccaacatgatggcacctgcaattccccctgacgtgcacagaggagatgtc
caggccgtcgcttacgaagagcccaagcactggtgctccatcgtctactacgagctgaac
aaccgcgtcggggaggcgttccacgcgtcctccaccagcatcctggtggatggcttcact
gacccctccaacaacaagaacaggttctgcctggggctgctctccaacgtcaaccgcaac
tccaccattgagaacaccaggcggcacatcggcaaaggtgtccatctgtactacgttgga
ggggaggtgtacgctgagtgtttgagcgacagcagcatcttcgtgcaaagccggaactgc
aactaccaccacggcttccaccccaccacggtctgcaaaatccccagtggctgcagtctg
aagattttcaataatcaagagtttgctcagctcctggctcagtctgtgaaccatggcttt
gagacagtgtacgagcttactaagatgtgcactctccggatgagttttgtaaagggctgg
ggagctgaatatcatcgccaggatgtaacgagcactccatgctggatagagatacatctc
catggtccccttcagtggctggataaagtacttactcagatgggctctcctcataatcct
atttcttcagtgtcttaa
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