Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446847
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Entry
135446847 CDS
T09958
Symbol
HPSE
Name
(RefSeq) heparanase
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle00531
Glycosaminoglycan degradation
zle01100
Metabolic pathways
Module
zle_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
135446847 (HPSE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zle00536
]
135446847 (HPSE)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
135446847 (HPSE)
Glycosaminoglycan binding proteins [BR:
zle00536
]
Heparan sulfate / Heparin
Enzymes
135446847 (HPSE)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
135446847
NCBI-ProteinID:
XP_064567338
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Position
4:41350981..41363897
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AA seq
584 aa
AA seq
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MLLELFQRVRKVLLTPARFLPAGSGALQLRARPPSSSGWCRRRRDGGPGAGMLLPPLLPL
LLPLLLLPPALAQGHRPAVLRLGLRDSPRAEVSPAFLSLTLDASLARDPRYVALLSNSKL
RALAAALSPGFLRFGGTETDFLIFDPNKDSTSEEKILWEFQAQQEACGSRPAFAAVEKML
LAQWPSQEKLILAEQNRKKHKNTTITKNTLDILYSFANCSGFHLIFGLNALLRKGGLQWD
SSNAQALLDYCASQRYNISWELGNEPNSFRKKSGIHIDGFQLGQDFIHLRQLLNNYALYQ
HAKLYGPDVGQPRKHTRRLLRSFLKSGGKVIDSVTWHHYYVNGQSATRGDFLSPEVLDSF
ATAIYEVLEIVGQTVPDKKVWLGETSSAYGGGAPRLSNTYVAGFMWLDKLGLSARQGIDV
VMRQVFFGAGTYHLVDANFEPLPDYWLSLLYKKLVGTKVLQVSLAGANKTKLRVYLHCTS
SLNPKYREGDVTLFALNLYNVTHHLELPDYLSSKHVDQYLLLPHGKENILSRSIELNGRV
LRMLDDETLPELVEKPLGPGRLLGLPPFSYGFYVIKNAKAIACI
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgttggagctcttccagagggtgaggaaggtcctgctcacgccagcgcggttcctc
ccggcggggagcggagcgctgcagctccgggcccgccctccgagctcctcggggtggtgc
cggcggcgtcgggatggcgggccgggagcggggatgctgctgccgccgctgctgccgctc
ctgctgccgctcctgctgctgccgccggcgctggcccagggacaccgaccggcggtgctg
cggctggggctccgggacagcccccgagcggaggtgagcccggctttcctctccctcacc
ctggatgccagcctcgcccgggacccgcgctatgtcgccttgctcagcaattccaagctg
cgtgccctggcagcggccctgtccccaggtttcctgaggtttggtggcactgagacagac
tttcttatctttgatcccaacaaggattcaacctcagaagaaaaaatcctctgggaattt
caggcacagcaagaggcttgtggctcgaggcctgcatttgctgctgttgagaagatgctg
ctggcccaatggcccagccaggagaagctgattcttgccgaacagaaccggaaaaagcac
aaaaacaccaccattacaaaaaatacactggatattctctacagctttgcaaactgctca
gggtttcacctgatctttggactcaatgccttgctgcggaaaggtggcttgcagtgggac
agctcaaatgcccaggcactgctggactactgtgcttcccagaggtacaacatctcctgg
gaacttgggaatgagcccaacagcttcaggaagaaatctggcatccacattgatggcttc
cagctggggcaagatttcatccacttacgccaactgctgaataactatgccctctatcag
catgccaagctctacggccctgacgttgggcagccccgaaagcacacacggagactgctc
agaagcttcctgaaatcgggagggaaggtgatcgactctgtcacatggcaccattactat
gtgaatggacagagtgcaacaaggggggatttcttgagccctgaagtgttggactccttt
gccacagccatatatgaagtcctggagattgttggtcagactgtgccggacaagaaggtg
tggctgggagagacgagctctgcctatggaggaggagctcccagattgtctaacacctat
gttgctggttttatgtggttggacaaactcgggctttcagccaggcaggggattgatgtg
gtcatgagacaggttttcttcggggcagggacctatcacctagtggacgccaactttgag
cctttgccggactactggctctcactgctctacaagaagctggtgggtaccaaggtgctg
caggtcagcctggccggagccaacaagacgaagctccgtgtctacctccactgcacaagc
agcctcaacccaaagtacagagaaggggatgtgacactgtttgctttaaacctctacaac
gtcacccatcatttggagctaccagattacctatcgagcaagcatgtggatcagtacctc
ttacttcctcatggcaaagagaatattctttccaggtccattgagctgaacggccgcgtg
ctgcggatgctggatgatgaaacactgccagagcttgtggaaaagccccttggtcctggc
agactgcttggccttccacccttctcctacggcttttatgttatcaaaaatgccaaagct
attgcttgcatttaa
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