KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446849
Entry
135446849         CDS       T09958                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:zle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zle03400]
    135446849 (HELQ)
Enzymes [BR:zle01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     135446849 (HELQ)
DNA repair and recombination proteins [BR:zle03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    135446849 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DNA_pol_lambd_f DUF3135 DGKD_4H Cdd1
Other DBs
NCBI-GeneID: 135446849
NCBI-ProteinID: XP_064567352
LinkDB
Position
4:41328038..41344173
AA seq 1054 aa
MAEPRLAVRRKGRSSSERKRSRAPVQPVAASSPVARKRPSSVSEGSPAEALCSNDSEEDM
FGDYDSFYGNDSLIAQVDDVEYKYLQDENMDVKAAGEVVLGNLQSGVHQKEQDNFSASQN
VVVLKSDKEAACQMQDSDPADSNQILTESILYDLPSSQLLYFEKMDELAAASRISPLSKG
RDERVDSFSDKIRDPLSFYAAAEHRNRSIDSSSHSKCVLFKSESLKDHLKSAMTGNARAQ
TLQVSKTKQLKEAVLSEEIFVARKAIESSSLDIGPFYGLPSKVKDLFRQLRGIETLYEWQ
HDCLMLESLQQRKNLIYSLPTGGGKTLVAEIIILQELLCRQKDVLMILPYVAIVQEKVRG
LSSFGIELGFLVEEYAGSKGRFPPIKRRVKKSLYIATIEKGHALVNSLIETERIDDLGLV
VVDELHMLGAGSRGAVLEITLAKILYTSKKTQIIGMSATLNNVGDLQKFLQAEYYTNNFR
PVELKEYIKIRDTIYAVDSKTENGFAFSHLLNFKYSSNLEKADPDHIIALVTEVIPKYSC
LIFCPTKKNCENVASMVCKYLKKEFRAHKEKEKQDLIKNLKSIGNGTVCPVLKQTIPFGI
AYHHSGLTNDERKSIEEAYSAGVLCLLACTATLAAGVNLPARRVILRAPYVGNDFLKKNQ
YKQMIGRAGRAGIDSAGESILIVQEKDKHLVQDLVHSPLENCYSNLLLELTKGIQSLMLS
LVGLKIAVTREEVDSFMCCTLLGVQQQLLSKEKSLSEIIQDGLENLIEKGLLKGRISEKD
HNSKSTLTITPLGKAAYKGSIDLAYCNILYQDLKKGLQGLVLESNLHLLYLSTPYDMTST
CSPDWMIYLRQFNQLSAAEQKVADIVGVPESFITKKASGQAVRKNVDNAVVNRFYLTFVL
YSLLKETNVWSVSEKFNLSRGYVQNLLSSAASFASCLLHFCEELEEFWVYKALLTELTKQ
LTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHLANANPETLVRMIEHLSRRQAKQI
ISSAKMLLSEKAEALQEEVEELLKVPTDIPGTTD
NT seq 3165 nt   +upstreamnt  +downstreamnt
atggcggagcctcggctcgccgtgcgtaggaagggccgctccagctcggagcgcaagcgg
agccgggccccggtgcagcctgttgccgctagctcgccggtggctcgcaagagaccgagc
tctgtcagcgagggatccccggcggaggcgctgtgcagcaatgacagcgaggaggatatg
tttggtgactatgatagcttctatggaaacgattccttgatcgctcaggtggatgatgtt
gaatacaagtacctgcaggatgaaaatatggatgtgaaagcagctggagaggttgtactt
gggaaccttcagtcaggagttcaccagaaagagcaggataacttctctgcttcacaaaat
gtggttgtgcttaaaagtgacaaagaggctgcctgccaaatgcaggacagtgacccagct
gatagcaatcaaatattaactgagtccattttatatgacttgccatcttcacaactcctg
tattttgaaaaaatggatgaacttgctgctgcttctagaatatctccactctcaaaaggg
agagatgaacgtgtggattctttctcggacaaaatcagagacccattgtctttttatgct
gctgctgaacacaggaacagatctatcgattcttcctcacactccaagtgtgttttattt
aaatctgagagtctcaaagatcacctgaaaagtgctatgacgggaaatgccagagcccag
actctgcaggtctccaagaccaagcagctcaaagaagctgttttatctgaagagattttt
gtggctaggaaagctattgaatcttcttctcttgatataggccctttttatggattacct
agcaaggttaaagatttattcagacaacttcgagggattgaaacactttatgagtggcag
catgattgcctaatgttagaatccctacagcaaaggaagaacttgatatactcattgcca
actggtggtggaaaaactcttgtagctgaaataataattctccaggaattgctctgcagg
cagaaggatgttctgatgatcctgccatatgttgccattgtccaagaaaaggttaggggt
ttatcgagttttgggatagaattgggtttcctggttgaagaatatgcaggaagtaaagga
agatttccaccaatcaaaaggagagtaaagaaatctctttatattgctactatagagaaa
ggacatgctctggtgaactcattaattgaaacagaaagaatcgatgacctcggcctggtt
gtggtggatgagctgcatatgctcggggcgggaagtcgaggagcagtactggaaattact
ctggcgaaaattctttacaccagtaaaaagacacagatcattggcatgagtgcaacgtta
aataatgttggagacctgcagaagttcctgcaagcagagtactacacgaataattttaga
ccggtagaattaaaggagtacataaagatacgagacaccatttatgcagttgacagcaaa
acagaaaatggctttgctttttcacatctccttaatttcaagtattctagtaatctggag
aaagcagatcctgaccacatcattgcacttgttactgaagttattcctaaatattcctgt
ctaatcttttgtcccactaaaaagaattgtgaaaatgtggcttcaatggtgtgcaagtac
ctcaagaaagaatttagagctcacaaggagaaagaaaaacaagatctcatcaagaaccta
aagagtattggaaatggaactgtctgtcctgttttgaagcaaacaatcccttttggtatt
gcctatcaccatagtggccttacaaatgatgaaagaaaaagcatagaggaagcttattct
gcaggtgtcctgtgtctgcttgcttgcacagccactctagctgctggagtgaacctacca
gctaggagggtgattctcagagctccttatgttggcaatgacttcctgaagaagaaccag
tataagcaaatgattggcagagctggtcgagctggtattgacagtgctggagaaagtatt
cttatagtgcaagaaaaagacaaacacttggttcaggatttagttcacagtcctttggag
aactgctacagcaatcttctgctggagctgaccaagggaatccagagcctaatgttgtct
ttggttggactgaagatagcagttacccgtgaggaagtggacagttttatgtgctgtacg
ttgctgggtgttcagcagcagctgctgtctaaagagaagagcctctcagagataattcaa
gatgggctggaaaatctaatagaaaaaggactcctaaaaggaagaatatctgagaaagac
cacaattccaaatctacactgacaatcacacccttgggtaaagctgcgtataagggctca
atagacttggcatactgcaatattctgtaccaagacttgaaaaagggtttgcaggggctg
gttctcgagagcaatcttcatctcctgtatctgtcaactccctatgatatgacttctact
tgtagcccagattggatgatatacttgagacagtttaaccagctaagtgcagcagagcaa
aaagtagcagatattgtgggagtacctgaaagctttattacaaaaaaggcttctggtcaa
gccgtcagaaagaatgtggacaatgctgtggtgaacaggttctaccttacatttgtcctt
tattcactactgaaagagaccaatgtatggagtgtttcagagaaatttaacttgtcccgg
ggatatgtgcaaaatctcctcagttctgcagcctcctttgcatcctgccttctacatttc
tgtgaggaattggaagaattctgggtttataaagccctgctgacagagcttaccaagcag
ttgacatactgtgttaagacagaactcatccctctgatggaggtagcaggggttctagag
gcacgagcaaaacagctttacaatgcaggatacaaaactttagcacacttggctaatgca
aatccagagactttggtgaggatgattgagcacttgtcacgacgtcaagccaaacaaata
atttcatctgcaaagatgctgctgagtgaaaaagctgaggctttacaggaagaagtcgaa
gaactcttaaaagtgccaacagatatcccagggaccactgattga

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