Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446855
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Entry
135446855 CDS
T09958
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135446855 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135446855 (SMARCA5)
03036 Chromosome and associated proteins [BR:
zle03036
]
135446855 (SMARCA5)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
135446855 (SMARCA5)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
135446855 (SMARCA5)
RSF complex
135446855 (SMARCA5)
WICH complex
135446855 (SMARCA5)
B-WICH complex
135446855 (SMARCA5)
NORC complex
135446855 (SMARCA5)
BRF complex
135446855 (SMARCA5)
NuRF complex (fruit fly)
135446855 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
SLIDE
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
135446855
NCBI-ProteinID:
XP_064567365
LinkDB
All DBs
Position
4:complement(41575960..41598804)
Genome browser
AA seq
969 aa
AA seq
DB search
MSAGQPPPQPNEPPAPPLPPGANTSEAAGTGPPCAAGLAGGDIKMEESFDDASLAKQKEI
QETDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ
NLLSAGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQIRGLNWLIS
LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLQNWMNEFKRWVP
TLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRI
KNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNN
CLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID
ILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLP
KLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHNERQASINAFNDPDSSKF
VFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV
EERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITDED
IDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKLAFTEWIEP
PKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYR
KTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQF
IKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQR
RISIKKALDTKELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSAQKRKMDGTPDG
RGRKKKLKL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgggcagccgccgccgcagccgaacgagccgcctgcgccgccgctgccaccg
ggcgccaacaccagcgaggccgcggggacggggccgccctgcgccgccggcctggccggg
ggcgacatcaagatggaggagtcttttgatgatgcatctttggcaaagcaaaaagaaatc
caggaaactgatcctacatatgaagagaaaatgcaaacagacagagcaaacagatttgag
tatctgttgaagcagactgagctctttgctcatttcattcagcctgctgctcagaaaact
ccaacttcacctttaaaaatgaaacctggacgtccacgaataaagaaggatgagaaacag
aatttactgtcagctggcgactatcgacaccgtagaacagagcaggaagaggatgaggag
ctgttaacagaaagctccaagacaacaaatgtctgcactcgatttgaagaatctccatca
tatgtgaaatggggaaaactgcgtgattaccagatccgaggcctgaactggctcatttct
ctgtatgaaaatggcatcaatggcatcctggcagatgaaatgggtcttgggaagacactg
caaacaatttctcttcttggctatatgaaacactacagaaacattcctggacctcacatg
gtgttagttcctaagtccactctgcagaactggatgaatgaattcaagagatgggtacca
acacttcgagcagtttgtttgattggtgacaaagaccagcgagctgcctttgtgagagat
gtgttgctgcctggagaatgggatgtctgtgtaacgtcgtatgaaatgcttatcaaagag
aagtcagtattcaaaaagttcaactggagataccttgttatagatgaggcccacaggatt
aaaaatgaaaaatcaaagttatcagaaattgtaagggaattcaagactaccaaccggctg
ctgttaactggaactccacttcagaacaatttacatgagctctgggcacttctcaacttc
cttttgccagatgtctttaactcagctgaagattttgattcgtggtttgataccaacaac
tgtctaggggatcaaaaactggtggagcgccttcatatggtgctacgaccattccttctg
cgtcgcatcaaggctgatgtggagaaaagcttgcctccaaagaaggaagttaaaatttat
gtgggcctcagcaaaatgcagcgagaatggtacacccgaatcctgatgaaggatatagat
atcctgaactcagctgggaagctggacaagatgagactgctgaacatcctgatgcagctg
cggaaatgctgcaatcacccttacctctttgatggagcagagcctggcccaccttataca
acagacatgcatttggtcaccaacagtggcaaaatggtagttctggacaaattgctacct
aagttgaaagaacaaggctcaagagttctaatcttcagtcagatgacaagagttctagat
attttggaagattactgtatgtggagaaattatgaatattgcagactggatggacaaact
cctcacaatgagcgacaggcttcaattaatgcattcaatgatcctgacagctcaaaattt
gtgttcatgttgagtacacgagcaggaggtcttggaatcaatctggctactgctgatgtt
gtaattctctatgattcagactggaatccacaagtagatctccaggctatggatcgagcg
cacagaattgggcagaccaagactgtgcgggtgttcaggttcatcacagacaataccgtg
gaggagaggatagtggagcgggcagaaatgaagctgcgcctggattccatcgtcatccag
caaggaagattggtggatcaaaacctgaataaacttggaaaggatgaaatgctgcaaatg
atcagacatggagcaacacacgtgtttgcttcaaaggatagtgagattacagatgaagat
attgatcacattttggaaagaggggcaaagaagactgcggaaatgaacgaaaaactttca
aagatgggtgaaagctcccttaggaattttactatggatactgaatctagcgtgtataat
tttgaaggggaagactacagagaaaaacagaagttggcatttacagagtggattgaacca
cctaaaagagaaagaaaagccaattatgctgtggatgcttacttcagagaggctcttcga
gtcagtgaaccaaaagcacccaaggctccacggcctccaaaacagccaaatgtacaggac
ttccagttctttcctcctcgcctgtttgaactcttggaaaaagagattctctactacagg
aaaacaattggttacaaggtacctcgtaatcctgatctcccaaatgcagcccaagcacaa
aaggaagagcagcttaagattgatgaggctgaacctcttaatgatgaagaactagaagaa
aaagagaaacttctaacccagggcttcactaactggaataagagagatttcaaccagttc
atcaaagccaatgagaagtggggccgtgatgacattgaaaatatagcacgagaagtcgaa
ggaaaaaccccagaggaagtcattgagtattcagctgtgttctgggaaagatgcaatgaa
ctccaagacatagagaagatcatggctcagattgaaagaggagaagccagaattcagaga
cgaatcagcataaaaaaggctcttgatacaaaggagctacaaaggaggtgtaatacttta
atcacactcattgaaagagaaaacatggaactggaagaaaaggaaaaggcagaaaagaag
aaacgtggaccaaaaccatcttcagcacagaagcgcaaaatggatggcactcctgatggg
cgtgggagaaaaaagaagctaaagttgtga
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