Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446867
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Entry
135446867 CDS
T09958
Symbol
TBC1D9
Name
(RefSeq) TBC1 domain family member 9 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135446867 (TBC1D9)
Membrane trafficking [BR:
zle04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135446867 (TBC1D9)
Endosome - Golgi transport
Rab GTPases and associated proteins
135446867 (TBC1D9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
135446867
NCBI-ProteinID:
XP_064567403
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All DBs
Position
4:42237782..42281935
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AA seq
1263 aa
AA seq
DB search
MWVNPEEVLLANALWVTERANPYFILQRRKGHGGDGGGGGLAGLLVGTLDVVLDSSARVA
PYRILYQAPDSLVYWTIACGCSRKEITEHWEWLEQNLLQTLSIFENENDINTFVRGKIQG
IIAEYNKINGIKEDDDTEKFKEAIVKFHKLFGMPEEEKLVNYYSCSYWKGKVPRQGWVYL
SINHLCFYSFLMGREAKLVIRWVDITQLEKNATLLFPDMIKVSTRSSEHFFSVFLNISET
FKLMEQLANIAMRQLLDNEGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFRL
PKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEENLCSLIIPLREVTIVEKAD
SSSVLPSPLSISTKNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYLDKNISGSYISSDD
EVFTRSSSLISASPHKSLSSESEGERQFNLNDNGIPTATQALMTMYRRRSPEEFNPKLAK
EFLKEQAWKIHFAEYGQGVCMYRTEKTRDLVLKGIPESMRGELWLLFSGAINEMTTHPGY
YEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQ
AMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYIPQLY
DCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFCEGIKVIFQLALAVLEANVDKL
LNCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLSDDVEPYPEVDIFRLIRSSYEKF
GSIRADLIEQMRFKQRLKVIQTLEDTTKRNVVRTIVTETSFTIDELEELYVLFKAEHLTS
CYWGGTSNATERHDPSLPYLEQYRIDFEQFKGMFALLFPWACGTHSDTLAARLFRLLDEN
GDLLINFREFVSGLSAACHGDLTEKLKLLYKMHVLPDPSPEQEEPDSAFEATQYFFEDIT
PDCTHVVGLDSRSKHGVDDGFVTVSLKTDKGKKSSQENRNYLRMWSQENKSKAKNTKDLP
KLNQGQFIELCKTMYNMFSEDPNEQDLYHATAAVTSLLLEIGEVGKLFSTQPPGDTDSSS
CSKAAQGELFPRKEQQQFPLEQHKAFRGGLAAGEEETAGTDGALGMHMEDIKLEDSSPRD
NGACSSMLISDDDTKDDSSMSSYSVLSAGSHDEDKLHCEDIGEDTVLVRSGRGPALRRST
SLDRDWAITFEQFLASLLTEPALVRYFDKPVSMMARITNAKNIRMRGKPITSASDYEIST
MSG
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaaccccgaggaggtgctgctggccaacgcgctgtgggtgacggagcgggcc
aacccctacttcatcctgcagaggaggaagggccacggcggcgatggcggcggcggggga
ctggcgggtctccttgtgggtactcttgatgttgtgttggactccagtgccagagtggca
ccatatcgaatcctctaccaagcaccagactccttggtctactggaccattgcctgtggt
tgctcgaggaaggaaatcactgaacactgggaatggctggaacagaatttgttgcaaact
ctttcaatctttgaaaatgagaatgacataaatacatttgtcagaggaaaaatacagggc
atcattgctgagtacaacaagatcaatggcatcaaggaggatgatgacactgagaaattc
aaggaagccatagtgaaatttcacaagctgtttgggatgccagaggaagagaaattagtg
aactactactcctgcagttactggaagggaaaggttccccggcagggctgggtgtatctc
agcatcaatcacctttgcttttactcttttctcatgggcagggaagcaaagttagttatc
cgttgggttgatatcactcagcttgagaagaatgctacgctgctcttccctgacatgatc
aaagtgagcacgaggtcaagtgaacattttttctcagtattccttaacatcagtgagaca
tttaaactgatggaacagcttgccaatatagccatgcgacagcttttggacaatgaagga
tttgaacaggacaggtcattgcccaaactgaaaaagaaatcccccaaaaaagtgtctgct
ctaaaacgagatcttgatgccagagcaaagagcgagagataccgtgcattgttccgactc
cccaaggatgagaaattagatggacacacagactgtactctttggactcctttcaacaaa
atgcatattttgggtcagatgtttgtgtctacaaactacatttgctttactagtaaagaa
gagaacttgtgcagccttattatccctcttcgagaggtgacaatagtggaaaaggcagac
agctccagcgtgctgcccagcccactgtcaatcagtacgaaaaacagaatgacattcctc
tttgccaacttgaaagacagagacttccttgtgcagaggatctcagactttctgcaacaa
accacctcaaaaatatacttggataaaaatatttctggaagctatatcagctcggatgat
gaggtgtttacaaggtcaagtagtttaatttctgccagccctcacaaaagcctgagctct
gagtcagagggagagcgacaattcaacctcaatgataacggaattccaacagcaactcaa
gctttaatgaccatgtatcggcgcaggtcacccgaggagttcaaccctaagctggccaag
gagttcctgaaggagcaggcctggaagattcattttgctgaatatggccaaggggtctgt
atgtatcgtacagagaaaacaagagaccttgtgctaaagggcattccagaaagcatgaga
ggggagctttggctgctcttctcaggagccattaatgaaatgaccactcatcctggctat
tatgaggacctagtggagaaatcaatgggaaaatacaatcttgctacagaagagatagag
agggatctgcaccgctcccttccagaacaccctgcattccagaatgagatgggtattgct
gctttaaggagagtcttgacagcttatgctttcagaaatccaaacataggatattgtcag
gctatgaatattgtcacttcagtgctcctcctttatgcaaaagaggaagaagctttctgg
ctgctggtggctctgtgtgagcgtatgctgcctgactactacaacacaagagttgttgga
gcattggtggatcaaggtgtctttgaagagttggctcgtgactacattccacagctttat
gactgcatgcaggatttgggtgtaatctccaccatctccctgtcctggttcctcactctt
ttcctcagtgtaatgccatttgaaagtgcagtggtagttgtggattgtttcttctgtgaa
ggaataaaggtgatatttcagttagcacttgctgtcctcgaagctaatgtagacaagttg
cttaactgtaaagatgatggagaagccatgacagtcttgggaaggtacttggacagtgta
actaataaggacagtactcttcctcccattcctcatcttcactccctgctcagtgatgat
gtagagccttatcctgaggtggatatcttcaggctaatcaggtcttcctatgagaaattt
ggaagtatccgggcagatttaattgaacaaatgagattcaagcaaagactgaaagtcatc
caaaccctcgaagatactacaaagcgcaatgtggtacggactattgtgacagagacttct
ttcactatcgatgaactggaggaactgtatgtgcttttcaaggcagaacacctgacgagc
tgctactggggagggaccagcaatgccacggagcggcacgaccccagcctgccctacctg
gagcagtaccgcatcgacttcgagcagttcaagggcatgtttgccctcctcttcccctgg
gcctgcggcacccactccgacacgctggctgcccgcctcttcaggctgctggatgagaac
ggagatctgctcatcaacttccgggaattcgtctctggcctgagtgcagcatgccatgga
gacctgacagagaagctgaagctactgtataaaatgcatgttttgcctgatccatcccct
gagcaagaagagccagactctgcttttgaagctactcagtacttttttgaggacatcaca
ccagactgtacacatgttgttggcctagacagcaggagcaaacatggagtagatgatggg
tttgttacagtgagtctgaaaacagacaaaggcaagaagagctcacaagagaatcgaaat
tacctgagaatgtggagccaagagaataaatccaaagcaaaaaacacaaaggacttaccc
aagctaaatcaggggcagttcattgagctgtgcaagacgatgtacaacatgttcagtgag
gaccccaacgagcaggacctgtaccacgccacggctgccgtgaccagcctgctgctggag
atcggggaggtggggaagctcttcagcacgcagccccccggcgacacggacagcagcagc
tgcagcaaggccgcgcagggcgagctgttccccaggaaggagcagcagcagttccctctg
gagcagcacaaggcgttccgcggcggcctcgcggccggcgaggaggagacggccggcacc
gacggcgccctgggcatgcacatggaggacatcaagctggaggactcctctcccagggac
aacggggcctgctcgtccatgctcatctccgacgacgacaccaaggacgacagctccatg
tcctcgtactcggtgctgagcgcgggctcgcacgacgaggacaagctgcactgtgaagac
atcggcgaggacacggtgctggtgcgcagcgggcgcggcccggccctgcgccgcagcacc
agcctcgacagggactgggccatcaccttcgagcagttcctggcctccctgctcacggag
cccgcccttgtcaggtacttcgacaagcccgtgtccatgatggccaggatcaccaacgcc
aaaaacatccggatgaggggcaagccaatcacctcggccagcgactacgagatctctact
atgtcgggataa
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integrated database retrieval system
