Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446900
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Entry
135446900 CDS
T09958
Symbol
WRN
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zle03032
]
135446900 (WRN)
03400 DNA repair and recombination proteins [BR:
zle03400
]
135446900 (WRN)
Enzymes [BR:
zle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135446900 (WRN)
DNA replication proteins [BR:
zle03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
135446900 (WRN)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
135446900 (WRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
RQC
HTH_40
HRDC
RecQ_Zn_bind
ResIII
SAM_GIDA_C
Motif
Other DBs
NCBI-GeneID:
135446900
NCBI-ProteinID:
XP_064567475
LinkDB
All DBs
Position
4:43153497..43182223
Genome browser
AA seq
1473 aa
AA seq
DB search
MDGVAAGLQDKYPQWMLTESQEEASLGHKKKPGAQRSVLEDGLPFLEFSGSVVYSYEASD
CSLLSEDIRQSLSEGAAVGFDIEWPPSYTKGKMARTAVIQMCVAEDRCYLFHVSSMAGFP
KGLKRLLEDETIKKVGVGIEGDQWKLMSDFEIKLKSFVELADIANDKLKCKETWSLNGLV
KHLFGRQLLKDPSVRCSNWEQFPLKEEQKLYAATDAYAGYIVYEKLKNMNKSDLKLCSMN
KDATSEGVKKHLASLAAEITDLASHIPDSSGQLENLQRATEILAEISGNISALKATLLCS
GSPSGLERSCGANRTHWEAKSASVKAQKAECAEQPEGDLNFCSDATLAVLWEEEMSGEEA
QRGNTALESGAPAARVTDREDRDDFMSLDITEQELQVLECQAAKELGSEAAPEEACSTDN
EQNVSCVIESDEELEMEMLKSLKDVDDCEGVLPEGESSKARKTPEVDVAPDSDEDEGVEE
EEEEYLDPLLPEPAESHIMCLKTYFGHSSFKPVQWKVINSLLEDRRDNLVVMATGYGKSL
CFQFPPVYTGQTGIVICPLISLMEDQVLQLTMTGIPACFLGSAQSKQVKDSIRGGQYRVI
YMTPEFCSGNLELLQDLDRTVGITLIAVDEAHCISEWGHDFRSSFRSLGLLKKTLPWIPI
IALTATASPSIRQDIVKCLDLRNPQVTCTSFDRTNLYLEVGQQSGDICRDLKQFLTRKGS
SSVYEFEGPTIIYCPTRKATEQVVCALKKLNVICGTYHAGMGNKQRRDTHHQFMRDEIQC
VVATVAFGMGINKADIRLVIHYGAPKEMESYYQEMGRAGRDGLPAACHVLWAATDLASNR
RLLGEIRDEGFRLYKLRMLAKMEKYLVSNGCRRKIILSHFEDRQLRKVSSGIMGTEECCD
NCRSSGSCLAVPSDFEGGLQDFGKQAQQLLSAVSALDEKFGTRMPILLLRGSCSQRLPER
YRRHPLFGCGKEWPENWWKLLCQQLIMEGFLKEVSGQNNKFATICVLTQKGRNWLSKDGS
APNPSLLLQSSEDLNLQRPSASSRRSPLLAKQRSPGTKGTAQSPGKQVSLYEMFSCYRKS
QTPPRNANMVNSVSGRSPLKSPLKPQQPSASSREKELETALYGKLLTARQKVANEKEIPP
AVLATNKILVEMARIRPTSIENLKKIDGVSEAKSTMLMPLLAEIKDFCQANGLQTDTFPA
AESKVQQEASPWKRARALSPSEEVTYTLFQEKNYSLRAISESRSLPLAVVGTHLCQALAA
GCTVSVERAGLTPDVQSLIRDIICSPPILSDTTKLQEIRKRTPANIELYLIKMMIVLLEK
ENRNKSQDGLGFKRRLVWPEGQQGKTGADQARREGALWNKTQGSGINPAAREGAGKTHLH
MVPSAWAAGSVDGSQAGSRGAAGPSKPTTVASSHQPALHPEQKAQLLADPQPKSLHPPVK
RRVPEWFGTSAATPGAVTQTKKCKTETKKGIFS
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggatggggtagctgctggcctgcaggataagtatccccagtggatgctcacagagagc
caggaagaagcttccttggggcacaaaaagaagcctggtgcccagaggagtgttctggag
gatgggctgcctttcttggagttctctggctctgttgtttatagctatgaagccagtgac
tgttccctcctctcagaagatatcaggcagagcctgtcagagggggctgctgtgggcttt
gacatcgagtggcctccatcctacaccaagggcaagatggccagaacagctgtaatccag
atgtgtgtggctgaggacaggtgctacttgttccatgtctcctccatggcaggttttccc
aagggactcaaaaggctgctcgaagatgaaacaattaaaaaggttggcgtaggaattgag
ggagatcaatggaagctgatgagtgactttgagatcaaactgaagagctttgtggagctg
gctgacattgctaatgacaaactgaagtgtaaggagacgtggagcctgaatggcctggtg
aagcacctctttggcaggcagctgctgaaggatccatccgtccgctgcagcaactgggag
cagtttccactcaaggaggagcagaagctctatgcagccacagatgcctatgctggctac
attgtttatgaaaaactgaaaaatatgaataagagtgacctgaaattgtgtagtatgaac
aaagatgccacatctgagggtgtgaagaagcacttggcttccctggctgcagagataaca
gacctggcttctcacatccctgactcttctggacaactggagaacttgcagagggctaca
gaaatactagcagagatatcagggaacatcagtgccttgaaagccaccctgctttgctca
ggttccccttctgggctggagaggagctgtggtgcaaacagaacgcattgggaagccaag
tcagcaagtgtcaaagcacagaaagcagaatgtgctgagcagcctgaaggtgacctcaac
ttctgctctgatgctaccctggctgtcctctgggaggaagaaatgagtggggaggaggca
cagagaggtaacactgctctggaaagtggggctccagcagccagggtcacagacagagag
gacagggatgacttcatgtccctggacattacggagcaagagctgcaggtcttggaatgt
caggctgccaaggaattgggaagtgaagctgcacccgaggaggcgtgttccacagacaat
gaacaaaacgtgtcctgtgtcattgagagtgatgaagagctggaaatggagatgctcaaa
tctctaaaagatgtagatgattgtgaaggagttctacctgaaggagagtccagtaaagcc
aggaaaactcctgaagtggatgtagcaccagacagtgatgaagatgaaggtgttgaggaa
gaggaggaggaatatttggatccactgctgccagagcctgcagaaagccacatcatgtgt
ctcaagacttattttgggcattcttcttttaaaccggtccagtggaaagtgatcaattct
cttttggaagacagaagagataatcttgttgtcatggcaactggctatggaaaaagcttg
tgcttccagtttcctcctgtttacactggacaaacaggaattgtcatctgccctcttatc
tccctgatggaggaccaggtgctgcagctgacaatgacagggattccagcttgtttcctt
ggttcagctcagtcaaaacaggtcaaggattccatcagagggggtcagtacagagtcata
tacatgactccagagttttgctcagggaacttagagttacttcaggaccttgaccgaact
gttggtatcaccctcatagctgtggatgaagctcactgcatctccgagtggggccacgac
ttcaggagctccttcagaagtttgggcttgttaaagaagactctgccctggatccccatt
attgcattgactgcaactgcgagtccctcgatcagacaggacatagtgaaatgcctggac
ctgaggaatccccaggtcacctgcaccagctttgacagaactaacctgtacctggaggtt
ggacagcaaagtggagacatctgtagggatttgaagcagttcctgactaggaaaggaagc
agttctgtgtatgagtttgaaggccccactatcatctactgccctacaagaaaggccact
gagcaggtggtgtgtgcactgaaaaaactcaatgtgatctgtggtacctaccatgctggg
atggggaacaagcagaggagagacactcaccaccagttcatgagggatgaaattcagtgc
gttgtggccacggtggcctttgggatgggcatcaacaaggctgacatccggctggtgatc
cactacggcgcccccaaggagatggagtcctactaccaggagatgggcagggccgggcgt
gacggcctccctgctgcctgccacgtcctctgggctgccactgacctggcctccaacagg
cgcctcctgggtgagatccgtgacgaggggttccggctgtacaagctgaggatgttggcc
aagatggagaagtacctggtgtccaatggctgcaggaggaaaatcatcctgtctcatttt
gaagacagacaactccggaaggtttcctctggcatcatgggcacagaagaatgctgtgat
aattgcaggtccagtggctcctgccttgcagtccccagtgactttgagggtggattgcag
gactttgggaagcaagcacagcagctgctgtctgcagtgagtgccctggatgagaagttt
gggaccagaatgccaattctgcttcttcgagggtcttgctcgcagcgcttgccggagcgg
taccgcaggcaccctctctttggctgtgggaaagagtggccagagaactggtggaaactg
ctctgccagcagctcatcatggaaggcttcctcaaagaggtttcaggccagaacaacaag
tttgcaaccatttgtgtgctcacccagaagggtcggaattggctgtccaaggatggatct
gccccaaatccaagtcttttgttacagtccagtgaagacctgaatcttcagagaccttct
gccagcagcaggcgttcgcctctgctcgccaagcagcgctcgcctggcacaaaaggaaca
gcacagtcaccaggcaagcaggtatctctatatgagatgttttcctgttacagaaaaagt
caaactcctccaagaaacgctaacatggttaacagtgtttcagggcgctcaccactgaaa
tctcctttgaagccccaacaaccaagtgcttcatccagagaaaaagagcttgagactgct
ctgtatggcaagctgctgactgctagacagaaggtagctaatgagaaggaaattcctcca
gctgtcttggcaaccaataagatcctggtggagatggcccggataaggcctacgagcatt
gagaacctgaagaaaattgatggtgtgtctgaagccaagtccaccatgttgatgcctctc
ctggctgagattaaggacttctgccaagcaaatggtttgcagaccgacacattccccgcc
gctgaatccaaggttcagcaagaagcatctccctggaagcgtgctagagccctttctccc
tcagaggaggtcacatataccttgttccaggagaaaaattactctctgagggccataagt
gagagcagatctctgcccctggcagtggttggcacccacctgtgccaggcgctggccgcg
ggctgcacggtgagcgtggagcgcgcgggtctgacccccgacgtgcagagcctcatcagg
gacatcatctgcagccctcccatcctctcagacactaccaaacttcaagaaattagaaaa
cgtactcctgccaatattgagctgtatctgatcaagatgatgattgtactactggagaaa
gagaatagaaataaatctcaggatggcttaggcttcaaaagaaggttggtgtggcctgaa
gggcagcagggaaaaacaggagcagatcaagcaagaagggaaggtgcattgtggaataaa
acacaggggagtggaatcaatccagcagccagggaaggagcagggaaaacccatctgcat
atggtgccttcagcttgggctgcagggagtgtggatggcagtcaggcagggagcaggggg
gcagcaggcccctcaaagcccaccaccgtggcctcctcccaccagcctgccctccatcct
gagcagaaggcgcagctcttggcagaccctcagcccaagagcttgcatccccccgtgaag
aggagggtgccagaatggtttggaacctcggcagcaacacctggagctgtaacccagacc
aagaaatgcaaaacagaaaccaagaaagggattttcagttga
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integrated database retrieval system
