Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446920
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Entry
135446920 CDS
T09958
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04810
Regulation of actin cytoskeleton
zle05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135446920 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135446920 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135446920 (CYFIP1)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135446920 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
135446920 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
135446920
NCBI-ProteinID:
XP_064567529
LinkDB
All DBs
Position
1:complement(33861938..33938630)
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AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIVGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLAKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS
LLLDKRLRSECKNQGATIQLLQSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYRSM
ELAIGRFESEDLTSIVELDGLIEINKMTHKLLSRYMTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLYGSKALNLAYSS
IYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYASLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVIKNVP
LKKMVERIRKFQILNDEIIAILDKYLKSGDGESTPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcaagtaactctggaggatgccttgtccaatgtggatctgttggaggaatta
ccattgccggatcagcaaccgtgtattgagcccccaccatcatctcttctctaccagcca
aacttcaacactaattttgaagacagaaatgcatttgtcactggtattgcaagatacatt
gagcaagccacagtccattctagcatgaatgaaatgctagaagaaggccaggaatatgca
atcatgttatacacatggagaagctgctcaagagccattccccaggtcaagtgcaacgag
cagcctaacagagtagaaatttatgagaaaactgtggaagttctggagccagaagtcaca
aaactgatgaattttatgtattttcagagaaatgccattgaacggttttgtggggaggtg
aggcgtttgtgccacgcagagagaaggaaggactttgtgtctgaagcctatctgatcaca
ctgggcaaattcatcaacatgtttgcagtgctggatgagttgaagaacatgaagtgcagc
gtgaagaacgaccactcggcctacaagcgagctgctcagttcctgcggaaaatggcagat
cctcagtccattcaagaatctcagaacctttccatgttccttgccaaccacaacaagata
acacaatctttgcagcagcagttggaggtgattgttggctatgaagaactgcttgcagat
attgtgaatttgtgtgtggactactatgaaaacaaaatgtacctaacacccagtgagaaa
catatgcttttgaaagtgatgggctttggattatacctgatggatggaagtgtcagtaac
atctataagttggatgcaaagaaaaggataaatttagccaagatagacaagtactttaag
cagttgcaggttgtcccactatttggtgacatgcagattgaacttgcaagatacattaag
accagtgcccattatgaggaaaataaatccagatggacatgcacatcttccagcagcagt
ccccagtacaatatatgtgagcagatgatccaaatcagagaagaccacatgcgtttcata
tctgaactggctcgttacagcaacagtgaggtggtgactgggtctggtcgacaggaggct
cagaaaacagatgcggaatatcggaagctctttgatctctctctccaaggcctgcagctt
ctctcccagtggagtgcccatgtcatggaagtgtactcgtggaagctggtgcacccaact
gacaaatattctaataaagattgtcctgacaatgcagaggagtatgaaagagcaacaaga
tacaattatactagtgaggagaagtttgctttggttgaggtgattgccatgatcaaaggt
cttcaggtgctgatgggacgaatggaaagtgttttcaatcatgccattcgtcataccatt
tatgcagctctccaggactttgcccaggtcactcttagggagccattaagacaagccatt
aaaaagaagaaaaatgtcattcagagtgttttgcaggccataaggaagacagtgtgtgac
tgggaagcaggtcacgagccattcaatgacccagctctaaggggagagaaggaccccaaa
agtggctttgacatcaaagtcccaagacgtgcagttggaccctccagcactcagctttac
atggtgagaactatgttagagtccctcattgctgacaaaagtggttccaagaaaaccttg
agaagtagccttgaggggcccaccatattggacatagaaaaattccatcgcgagtctttc
ttctacactcatttgataaatttcagtgaaaccctgcagcaatgctgtgatctgtcccag
ctgtggttcagggaattcttcttagagctgaccatgggcagaagaatccagtttcccatt
gagatgtccatgccttggattttgacagatcacattttggagacaaaagaggcatcaatg
atggagtatgttctgtattctttggacctttataatgacagtgctcattatgcacttacc
aaatttaagaagcagttcctctatgatgaaattgaggcagaggtaaacctgtgttttgac
caatttgtctacaagctggcagaccaaatatttgcatactacaaggcaatggctggcagc
ctgcttctggataaacggctgcgttcagagtgcaagaaccagggagcaaccattcagctg
ctgcagtccaaccgctacgagacactgttgaaacagagacacgttcaactcctgggcagg
tccatagacctgaaccggctgatcacgcagcgcatctcggccgccatgtaccgctccatg
gagctggccatcggccgcttcgagagcgaggacctgacctccattgtggagctggatggc
ttgatagagataaacaaaatgactcacaagcttctgagcagatacatgaccttggatagc
tttgatgccatgttcagagaagccaaccacaatgtttcagccccttatggcagaatcact
cttcatgtcttttgggaactcaattatgatttccttccaaactactgctacaatggatca
actaacagatttgttcggaccgtgctgccattttctcaggagtttcagcgtgataagcag
cctaatgcacagccacagtatctctatggatcaaaggcattgaatttggcatattccagc
atttacagcaactacaggaattttgttggtcccccccacttcaaagtcatctgtagactt
cttggatatcagggcattgctgtggtgatggaggagttgctgaaagttgtcaagagcctg
ttacaagggaccattcttcagtatgtcaagaccctaatggaagtgatgccaaagatctgt
aggttaccaagacatgagtatggctctccaggtatcttggagttttttcaccatcagttg
aaggacattgttgaatatgcagaactgaagactgtctgcttccagaatttacgggaagtg
ggaaatgctgtcctgttttgcctcctcattgaacagagtctgtctctggaggaagtgtgt
gacctgttgcacgcagcgccattccagaacatcctgcccagggttcacgtcaaagagggt
gaaagacttgatgcgaaaatgaagagactggaatcaaaatatgcttcactacatttggtt
cctctcattgaaagacttggcacaccccagcaaatagcaatcgcaagggagggggacttg
ctgaccaaagaacgcctgtgctgcggcctgtccatgttcgaggtgatcctgacgcggatc
cgctccttcctggacgatcccatctggcgcgggcccctgcccagcaacggggtgatgcac
gtggatgagtgtgtggagttccaccgcctctggagcgcaatgcagttcgtttactgcatc
cccgtgggaacgcacgagttcactgtggagcagtgctttggggatggcttgcactgggct
ggatgtatgatcatcgtgcttttgggacagcagcggcgctttgacgtgttggatttctgc
taccacctgttgaaagtccaaaagcacgatggcaaagatgaggttatcaagaatgtgcct
ttgaagaaaatggttgagagaattcgcaagttccagattttgaatgatgaaataattgct
attttggacaagtatttgaagtccggcgatggagagagcacacccgtggaacacgtgcgc
tgcttccagccaccaattcatcagtcccttgccagcaactag
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