Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447119
Help
Entry
135447119 CDS
T09958
Symbol
RAB11FIP5
Name
(RefSeq) rab11 family-interacting protein 5 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135447119 (RAB11FIP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135447119 (RAB11FIP5)
Membrane trafficking [BR:
zle04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
135447119 (RAB11FIP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
135447119
NCBI-ProteinID:
XP_064568003
LinkDB
All DBs
Position
4:64584675..64625082
Genome browser
AA seq
1507 aa
AA seq
DB search
MALLRAAALPAEGCPAWLPTHVQVTVVRARGLRCKGGGKGKAGGSDAYTVIQLGREKYST
SVAEKSGGSPEWREECAFELPPEPGACAELVLTVMHRALVGMDRFLGQALVPLEPARQRG
RGPDERWYKLHSKAGKKEKERGEILVSLQFTRHSLTASMFDLSVKDKARSPFGKLKDKVT
GKKKYDLESASAIIPSSMAALDMEDDLELGGKKSKLKGFFLKNKLRRSSLTQSSTSLGSD
STISSASLSLAAPMPEVPRSPSRQGSLSSERSVKEPLASPKLSHKRAFSDDVSQCGPAEV
PQSPQARRDPGSRSSLCINGSHVYGEEAAVPRNPPASAPLPVPRRQDEPLGFTPLHAEPH
WGLGSLERAQQRDEPRFIPSPPSLALQEELKVSTKAVTLSNHLGRARMEESARLEGKPSQ
GAAPPGFPTEPAKDRATEDTRKEDKKAKGGFFHHGGKGQGDRGTPVHTSAAGDERSKSSG
WFGSKEPKESPQKPSLEVSPQVETSSDAPSHCAPRSPAPCPAALAASMPSSNLPPAPGDR
QAGCLAPTNPFLDSLQSNPFFEELLADQVLNSPSPTHFLSSFPPGPRAAPEVAGSFYSSE
DCSPSGSPRRTEPQRESPAQSVGVPVPETSPPAPGELPPADTDTEPAVPSEWDDTFDAFA
TSRLKPERNKENFFASVAAEGMAFIDDPRASPTESSAGPPCQKGSQVFEKAAEIPAALRS
WTNFSALDVGANLVSTTQEATVIEDVLSPVSAGSMARRRKSSTPMVWTAAFASGNPGDKE
ASAALSTENSAREEGDSGEEESCSTGTNGWMTIATESAAEPSESAGEHPAPQAPFGPRPP
FLGEGTFEAQSSSRATTTTCVLPMSSFPAEPAPEAPPGSTVVAAVPPRVPGDAAGRRFPE
AGLEPGEGALDIRSSVFRLQASMRLEASEGLLHFSSDIRERRVVLSPWAGPQGCPELPPG
PPPKPPRRFAAAGPVGDGEDEEPGGTQRGRQEPWEESEGPGAEMGLPRNRASSEPSVPAP
PILLAPGAAAAEAGREFAASEGARAVAMDPAAGVGIGADASVGEHPSDMNETDVAEQFET
CMSNFSLDGLDRSGAEESRSQPRLSPQGATDSAKWEMASKQELFPEELSISGLNPPSKLD
LGQPTSWTALGEQEAAGHPHPPPQRLEHRQRPCQLELACQDGEGRAGEQPRPRAPPREAE
QGRTPASEEPQGRWAESRIDFKKADFWKPDKIERHTQGASAPRNPFTLALSPNSPSNPFV
ERPPAPVPVQAVLPEKLEQGDFSFRSPQEEPPGHGLQPTNATPLHVSPPLAFSTPFPAAA
TNPEPCGRPRAPAGVPARRAAARPCPCPQPGEASALLVLPRETRPAEKPLGQQTTSPHPV
KPLSAVQEGSSERKQQHRASLGSALSNGLERLKTVTTSSVQPLAPTSQQDKTDPKVKQDP
GQLDQSAKYYHLTHDELIQLLLQKEGELSKKEEHIQELENYIDQLLVRIMEQSPTLLQIP
LGGGQAP
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctgcgggcggccgcgctgcccgccgagggctgcccggcctggctgcccacg
cacgtccaggtgacggtggtgcgggcccgcgggctgcgctgcaagggcggcggcaaaggc
aaagcgggcggcagcgacgcgtacaccgtgatccagctgggccgcgagaagtacagcacc
tcggtggccgagaagagcggcggcagcccagagtggagggaggaatgtgccttcgagctg
ccccccgagcccggggcctgcgccgagctggtgctcacggtgatgcaccgggcgctcgtg
ggcatggaccggttcctgggccaggccctggtgcccctggagcccgcccggcagcgcggc
cgcgggcccgacgagcggtggtacaagctgcactccaaggctgggaagaaggagaaggag
cgtggtgagatcctggtgagcctgcagttcaccaggcacagcctgaccgccagcatgttc
gacctgtccgtgaaggataaggcacgctcgcccttcggcaaactcaaggacaaagtgacg
ggcaagaagaagtacgacctggagtcggcctctgccatcatccccagcagcatggcagcc
ctggacatggaggatgacttggagctggggggcaagaagtccaagctgaagggtttcttc
ctgaagaacaagttgcggcggtcgtcactgacgcagtccagcacgtccctgggctcggac
agcaccatctcctctgccagcctgagcctggcagcgcccatgcctgaggtgcccaggtcc
cccagcaggcagggcagcctgtccagcgagcgctctgtgaaggagccgctggcctcgccc
aagctgagccacaagcgagcgttcagcgatgatgtgtcccagtgcggccccgcagaggtc
ccgcagagtccccaggcccggagggaccccggctcccgctcgtccctgtgcatcaacggc
agccacgtgtacggggaggaggcggcggtgccccggaacccgcccgcctccgcgcccctg
cccgtgccccgcaggcaggacgagcccctgggcttcaccccgctgcacgccgagccccac
tgggggctgggcagcctggagagggcccagcagagggacgagcctcgcttcatcccgtcc
cctcccagcctggctctgcaggaagagctcaaggtgtccaccaaggccgtgaccctcagc
aaccacctgggcagggcgaggatggaggagagcgcccgcctggagggcaaacccagccag
ggtgcggctcctccgggcttccccaccgagccagccaaggacagagcaaccgaggacacc
aggaaggaggataagaaagccaagggaggcttcttccaccacgggggcaaaggccagggg
gacagagggacccccgtccacacctctgccgcgggggatgagaggagtaagagcagcggc
tggtttgggtccaaggagcccaaagagtcccctcagaaacccagcctggaagtgtctcct
caggtagaaaccagctcagatgctccttctcattgtgctccccgctcccctgccccgtgc
cccgctgcccttgccgctagcatgccgagctctaacctccctcccgctcctggagacaga
caggccggatgcttggcccccaccaacccattcctcgactccctgcagagcaatcccttc
tttgaggagctcctcgctgaccaggtactaaattctccttcacctactcactttctctct
agtttcccgcctgggccgcgtgctgcacccgaggtcgctgggagcttttattcctctgag
gattgcagtccctctggctccccaaggcgcacagagccccagagggagtctccagcccag
agcgttggtgtccccgtgcctgaaaccagtcccccagcaccgggagagctccctcctgcc
gacactgacacggagcctgctgtcccctcggagtgggacgataccttcgatgcctttgcc
accagcaggctcaaaccagagcggaacaaggagaacttttttgcctcggtggcagcagag
ggcatggctttcatcgatgaccccagagccagcccgacggagagctcagcggggccgcct
tgccagaagggctcccaagtgttcgaaaaggcggctgaaatccctgcggctctccgctct
tggacaaatttctccgctttagacgtgggggccaacctggtgagcaccacccaggaggcc
acggtgatcgaggacgtgctgagccccgtgtccgcgggctccatggccaggaggaggaaa
agcagcacgcccatggtctggacagccgcctttgcctcgggcaaccccggggacaaagag
gcgtcagcagcactgagcactgaaaatagcgctagggaggagggggacagcggtgaggag
gagtcctgcagcacggggacgaacggctggatgaccatagccacggagagcgccgccgag
ccctcagagagcgccggggagcacccggctcctcaggcccccttcggcccgcgcccgccc
ttcctgggcgagggcaccttcgaagcccagagctcgtcccgtgccaccaccaccacctgt
gtgctacccatgagctccttccccgccgagccggcccccgaggccccgccgggcagcacc
gtggtggcggccgtgcccccgcgggtgccgggggacgcggcgggacggaggttccccgaa
gcgggcttggagcccggggagggcgccttggacattcgcagctcggtgttccggctacag
gccagcatgcggctggaggccagcgagggcctgctgcacttcagctccgacatccgcgag
aggcgcgtggtgctgtcgccgtgggcagggcctcagggctgcccggagctgccgcccggg
ccgccccccaaaccaccccggcggttcgcggccgcgggccccgtgggggacggcgaggac
gaggagcctggtggcacccagcgaggcaggcaggagccgtgggaagagtcagagggccca
ggagcagagatgggattgccgaggaaccgtgcgagcagtgagccctccgtgccggcgcct
cccatcctgctcgcacccggagcggccgccgctgaagccgggagagagttcgcagcgtct
gagggtgccagagctgttgctatggacccagcagctggtgtggggataggagccgacgcc
tctgtgggcgaacacccatcagacatgaacgagacagatgtggccgaacagtttgagact
tgcatgtccaacttctccctggatggactggaccggtcgggtgctgaggagagcaggagc
cagccccgtttatcccctcagggggccacagacagtgccaagtgggaaatggcctccaag
caggagctgttccccgaggagctcagtatttcaggactaaacccaccttccaagctagac
ctgggccagcccaccagctggacagctctgggagagcaggaggcagctgggcatccacac
ccgccgccccaaaggttagaacacaggcagaggccatgccagctggagctggcgtgccag
gatggcgaggggcgagcaggagagcagcccaggccccgtgcccctccccgggaggcagag
cagggcaggacccccgccagcgaggagccccaggggcgctgggcagagagcaggatagac
ttcaagaaagccgatttctggaagccagataagatagagaggcacacacagggagcttca
gccccgagaaaccccttcaccctggcgctgagccccaattccccgagcaaccccttcgtg
gagaggcccccagcccctgtccctgtccaggctgtgctgcccgaaaagcttgagcagggc
gacttcagcttccgcagcccgcaggaggagccccccgggcacggcttgcagcccactaac
gctacccccctgcatgtcagcccgcccctggccttctccacccctttccccgcggctgcc
actaaccccgagccgtgtggccgcccccgggcccccgcgggggtccccgcccgccgcgcc
gccgcccggccctgcccgtgcccgcagcccggggaagcttcggcgctcctggttctgccc
agggagacacggccggctgagaagccccttggccagcagacgaccagcccccaccccgtg
aagcccctgagtgcagtgcaggagggctccagcgagaggaagcagcagcacagggccagc
ctgggctcagcactgagcaatggcctggagaggctgaagacagtgaccacgagcagcgtc
cagcccctggccccgacctcccagcaggacaaaactgaccccaaggtaaagcaggaccct
ggccagctggaccagtcagccaagtattaccacctgacccacgatgagctgatccagctg
ctgctgcagaaggagggcgagctgagcaagaaggaggagcacatccaggagctggagaac
tacattgaccagctgctggtgcgcatcatggagcagtcccccacgctgctgcagatccct
ctggggggaggccaggccccctga
DBGET
integrated database retrieval system
