Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447201
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Entry
135447201 CDS
T09958
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04140
Autophagy - animal
zle04148
Efferocytosis
zle05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135447201 (VPS16)
04148 Efferocytosis
135447201 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135447201 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135447201 (VPS16)
Membrane trafficking [BR:
zle04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135447201 (VPS16)
Hops complex
135447201 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
135447201
NCBI-ProteinID:
XP_064568175
LinkDB
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Position
4:complement(70785352..70819080)
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AA seq
837 aa
AA seq
DB search
MDCYTANWNPLGEETFYRKLELYSMEWGLREDLRDCVVAAAPYGGPIALLRNSRRDKTPS
TRPLLEIYSASGLLLASVPWKSGPLVHLGWTAGEDLLCIQEDGTVLVYNLFCEFKRHFSM
GNEVLQNHVLEAQVFHTEFGTGVAILTGALRFSLATNIDDLKLRRLPEVPGLQKAPPCWT
VLAQDRVTMVLLAMGQELFLLDNTSCSVLTPPGLSPSAGPFLHVAVSFTHRQLALFCDSG
CVWMGAASLKEKFCEFNTGIRTPPKQMVWCTRPRSRQRAVVLAWERQLMVVGNSSECIRF
VLDEDSYLVPELDGVRILSRSTHEFLHEIPEASQEIFRIASMAPGALLLEAQKEYEKESQ
KADEYLREIREQQLLPEAVGQCIEAAGYEHEPETQKSLLRAASFGKCFLDKFPPEGFVRM
CQELRVLNAIRDYQIGIPLTFTQYKQLTIEVLLDRLVLRRLYPLAIRICEFLRLPEMQGV
SRILAHWACYKVQQKDKSDEEVAQAINQKLGDTAGISYSDIATRAYDCGRAELAIKLLEY
EPRSGEQVPLLLKMKRSKLALGKAIESGDTDLVYTVVLHLKNELNRGSFFMTLQNQPVAL
SLYRQFCRHQERETLKDLYNQDDNHQELGNLHVLGGYGQKRIEGRVAALQNALDEFYKAK
NDFAAKATEEQIKLLRLQRHLQEELDKPYLDLSLHDTVATLILDGHHKRAEQLYRDFRIP
DKRYWWLKINALATRGDWEEMEKFSKSKKSPIGYLPFVEVAVKHHNRYEAKKYAPRVPPE
QRVKAFVLVGDLEQAAEAAVERRNEAEMSLVLSRCSPGTDSALVERLNRARAQLLKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggattgttacacggccaactggaacccgctgggcgaggagaccttctaccggaagctg
gagctctactccatggaatgggggctgcgggaggatctccgtgactgtgtggtggcagct
gccccgtatgggggtcccatagctctgctgaggaattcccggcgggacaagacccccagc
acccgcccgctcctggagatctactcggcctcggggctgctcctggccagtgtcccgtgg
aagagcggccccctggtgcacctgggctggacggcgggggaggacctgctgtgcatccag
gaggatggcactgtcctggtctacaacctgttctgcgagttcaagcggcacttcagcatg
ggaaacgaggtgctgcagaaccacgtgctggaggcgcaggtgttccacacggagttcggc
acgggcgtggccatcctgacgggagcgctgcgcttctccctcgccaccaacatcgacgac
ctcaagctgaggcgcctgcccgaggtccctgggctgcagaaggccccgccgtgctggacc
gtgctggcccaggacagggtgaccatggtgctgctggccatgggacaggagctcttcctg
ctggacaacacctcctgctccgtgctgacgccccccgggctgagcccctcggcggggccg
ttcctgcacgtggccgtgtccttcacccaccggcagctggcgctgttctgcgactccggc
tgcgtctggatgggagcggcctcgctcaaggagaagttctgcgagttcaacaccggcatc
cgaaccccgcccaagcagatggtttggtgcacgcggccccgcagccggcagcgcgccgtg
gtgctggcctgggagcggcagctcatggtggtgggcaactcctcggagtgcatccgcttt
gtcctggatgaggattcctacctggtgcccgagctggacggggtcaggatcctgtcccgc
agcacccacgagttcctgcacgagatccccgaggccagccaggagattttccgcatcgcc
tccatggccccgggcgctctgctgctggaggctcagaaggagtacgagaaggagagccag
aaggccgacgagtacctgcgggagatccgcgagcagcagctgctccccgaggccgtgggc
cagtgcatcgaggctgcgggctacgagcacgagcctgagacccagaaatccctgctgagg
gcagcatcctttgggaagtgtttcctggataagttccctccggaggggttcgtgcgcatg
tgccaggagctgcgggtgctcaacgccatcagggattaccagatcgggatcccgctcacc
ttcacccaatacaagcagctcaccatcgaggtgctgctggacaggctggtgctgcgccgc
ctgtacccgctggccatccgcatctgcgagttcctgcgcctgcccgagatgcagggcgtc
agccgcatcctggcacactgggcctgctacaaggtgcagcagaaggacaagtcggacgag
gaggtggcccaggccatcaaccagaagctcggggacacggcgggcatctcctactcggac
atcgccacgcgcgcctacgactgcggccgcgccgagctggccatcaagctgctggagtac
gagccccggagcggggagcaggtgccgctgctgctcaagatgaaacggagcaaactggcc
ctgggcaaagccatcgagagcggggacaccgacctggtgtacaccgttgtgctgcacctc
aagaacgagctcaaccgcggctccttcttcatgaccctgcagaaccagcccgtggcgctg
agcctgtaccgccagttctgccggcaccaggagcgggagacgttgaaggatttgtacaac
caggacgacaaccaccaggagctgggcaacctgcacgtgctggggggctacggccagaag
cggatcgagggccgcgtggccgccctgcagaacgccctggatgagttctacaaggccaag
aacgactttgctgccaaggccaccgaggagcagatcaagctgctgcggctgcagcggcac
ctgcaggaggagctggacaagccctacctggacctgtccctgcacgacaccgtggccacc
ctcatcctggacgggcaccacaagcgcgccgagcagctctaccgggacttcaggatcccg
gacaagaggtactggtggctgaagatcaacgccctggccacccgcggggactgggaggag
atggagaagttctccaagagcaagaagtcgcccattgggtacctgcccttcgtggaggtg
gcggtgaagcaccacaaccgctacgaggccaagaaatacgcgccgcgtgtgccgcccgag
cagcgcgtcaaggccttcgtgctcgtgggggacctggagcaggcggccgaggcggccgtg
gagcgcaggaacgaggccgagatgagcctggtgctgtcccgctgctcccccggcaccgac
agcgccctggtggagaggctgaaccgcgcccgggcacagctcctcaaaaagtga
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