Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447353
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Entry
135447353 CDS
T09958
Symbol
LRIT3
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zle04990
]
135447353 (LRIT3)
Domain-containing proteins not elsewhere classified [BR:
zle04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
135447353 (LRIT3)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
Ig_2
LRR_1
fn3
LRR_5
ig
LRR_14
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
LRR_EndoS
LRR_6
LRR_9
C2-set_2
Fn3_ELFN
LRRNT
Motif
Other DBs
NCBI-GeneID:
135447353
NCBI-ProteinID:
XP_064568355
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All DBs
Position
4:28890206..28901929
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AA seq
654 aa
AA seq
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MYLFICFYLLMSFFEEIHGFCPSQCTCVYHGRSDGTGTRSVLCNDPDMYEIPVNVPVDTV
KLRIEKTVIRRIPTEAFYYLVDLKYLWVTYNCVANIDISSFYNLKQLHELRLDGNLLSTF
PWESLAEMPNLRTLDLHNNKLTSIPADAGRFLRNLTYLDLSSNKLTTLPSDLMDIWPPFS
GAIVSKNTDILVTQRVILGFQDNPWFCDCRISKLIEFSKIVDTSVVLLDPLVSCSGPESL
AGILFQRAELEQCLKPSVMTSATKITSPLGSNVLLRCDATGYPTPQLTWSRSDNIPVNYT
VIQETPGEGVRWSIMSLTGISYKDAGEYRCKAKNLAGMSEAAVTVTVVGVVTTTVSPQKF
GRKPEAERQNTTQEESKQEPERTTTPLPITSTTTALVSTERSTSMTFTDRKQSRLMLDGK
KVSKAVTNGNRKQIGELSKKGEDTLLSAAGMAEQNVTVKNLRVISESDERVTLTWKTVNA
TGNSAVTVLYSKYGEKDMLPLSTDSNKNKVTIDGLQPSTQYMACVSPKGVPPTKEQCVVF
STDGLNEESSSEFSILIVGSSAACVVVLPLIFFLLYKVLKLHLKPKSAKEAELAKETYVQ
FETLSLKPRTLGAGDQLWARRYTDESERLLLCSRSSMDSQMTFKSEGSRSEYLC
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtttatttgcttctacctcctaatgagtttttttgaagaaattcatggcttt
tgtccttcacaatgcacttgcgtttaccatggcagaagtgatggcactggaacaaggtct
gtactctgtaatgaccctgacatgtatgagatccctgtgaatgttcctgtggatactgta
aagcttcgtatcgaaaaaactgtcatacgaaggattccgactgaagccttttactacctg
gtagatctcaagtacctgtgggtcacttacaactgtgtagccaacattgatatcagcagc
ttctataacttgaaacagctgcatgagctgaggctggatggtaatctgctctcaactttc
ccttgggaatccctggccgagatgcccaacttacggactcttgatctccacaacaacaag
ctgaccagcattcccgctgatgctggccgcttcctgagaaacctcacctacctggactta
tccagcaacaagctgaccaccttgccatcagacctcatggacatttggccccccttctca
ggagctattgtatccaagaacacagacattctggtgacacagagagtaatcttgggtttt
caggacaacccatggttttgtgactgccgcatttcaaagctaattgaattttccaaaatt
gtggacacctccgttgtacttcttgatccattggtttcgtgtagtggacctgagagcctg
gcaggaatcttgttccagagagctgagttagagcagtgtcttaaaccatcggtgatgacc
tcagcaacaaaaatcacctccccgttgggcagcaacgtcctgctacgctgtgacgccacg
gggtacccaacaccacagctcacttggagtaggtcagacaatattccagtcaactacaca
gtaattcaagaaactcctggagagggtgtcaggtggtccataatgagcttgacaggaatt
tcatacaaggacgcaggagaatacagatgtaaagccaagaacttggcaggaatgtcagaa
gctgctgtgactgtcacagtggttggtgtagttactacaactgtgtcaccacagaagttt
gggaggaagccagaggctgagaggcagaatacaactcaggaggaatccaagcaggaaccc
gagaggacaaccacacctcttcccatcacatcgaccaccacagctctggtgagcactgaa
agatcaaccagcatgacttttactgacaggaagcaatccaggctcatgctagatggaaag
aaagtttcaaaggcagtgacaaatggaaacagaaagcagattggagagttaagcaagaaa
ggtgaggatactctattgagtgcagcaggtatggctgagcaaaatgttactgtgaagaac
ctaagggtgatcagtgaatctgatgaaagagtgaccttaacttggaaaactgtcaatgcc
acaggcaattctgctgtgactgtgttatactccaagtatggtgagaaagatatgttgcct
ctcagcacagattctaacaaaaacaaagtcacaatcgatggtttgcaacctagtactcaa
tatatggcatgtgtgtcacccaaaggcgtgccacctacaaaagagcagtgtgttgttttc
tccactgatgggttaaatgaagaaagcagctctgagttttccattctgatagtgggcagc
agtgcagcatgtgtggttgttttacctttgatatttttcttactctacaaagttttgaaa
cttcatttgaaaccaaaatctgcaaaggaagctgaacttgcaaaagagacttatgtgcag
tttgaaacactgtcgctgaagcctcgaacactgggtgcaggagaccagctctgggcacgg
aggtacacggatgagtcagaaagacttctcctttgctctaggtcaagcatggattctcaa
atgaccttcaaaagtgagggctccaggtctgagtatctgtgctga
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