Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447459
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Entry
135447459 CDS
T09958
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135447459 (SH3TC1)
Membrane trafficking [BR:
zle04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
135447459 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_10
TPR_2
SH3_1
ARM_TT21
ARM_TT21_4th
TPR_1
ARM_TT21_C
Csd3_N
SH3_2
Gp10A-like
Motif
Other DBs
NCBI-GeneID:
135447459
NCBI-ProteinID:
XP_064568467
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Position
4:complement(52812994..52844300)
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AA seq
1340 aa
AA seq
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MESLAGGTSMLSTNTIVPALEGAQDRNLEREGAEQEMCRCDWKHVESKVAISTLRDGAGM
DTLQKQMECSPSEKCMNVSSRTLPSQAENFPTDISLKLTMVKRKSGCPDPRLQRQLRGHL
RLLENDSKEVMTVFSELSARLLSIHSDQDLIVVTFKTFEEIWKFLTYHSLGKAVSLYNSS
AGFINHCMENLFLDQSFWLYSQEEEDTGIEVCINEKSLNLMYRSLLVQEGSFFVLYPDNT
IRKMMVTDKESTSFETGAFTEDVTAGSVDSDMPMWSNASLEPLEPFHQWFLKGYSNSIDF
SYKNESKSIKKVAMGSGLAVMNYESIVSEELSFQEGDKIEILGYFIECMEWFLGRHVCTD
QIGFVKTGHVKLDLPRNKPQHLDFLEAEELSFFSKEKNLEEVVHLLKQTSITDVCSVYRI
DELEEPEFQKAHECEIARSPSSPGSTSKNGKIEELLKNIKNLEATQAEEPAAEGKESAGS
TKTEIFPLPEGPCFHICQEDSQAYDIFEPLLLFLNRKEYESNFKSLYNSSYSFTNSMFYG
FSEEEELVNFFRLAREAAKKAGLSWALARLCFLLGRLSVKKLKFSQGRVYFEEALRAVAG
EFSDLYFVIALYTNLTVIYLTQKNKEKCTHIFDKAASLLMGIPNYICSADLESDILKYAL
KRTILSQNKHAEARACFLLAKHYSARKQHQEALPFLERFQLLLNDLGLQNSLSNHCYFKL
AESYHEKCLPHIVLSCVKVTSPQSSSTLMDSLKRIDLVIKNAPRLYGLRKLRQIFPSQIA
PYLIQALSSVFTNEEEGLCSTIYLSLAKLYSHHKQYGKAIAYMMKALDSASARPEETINY
LVSLAWLYILYKQYEVALAILNAVVGSAWSSPHQLGIAYNMLAIALKRTNNTKGAAESYY
KALRLSEETEVTHNQAIALANFGALCLHAAARKLAEHYFIRAVKLFSKLPIMDCGQDFIQ
VLLQLGRYYVGGTEREKGRFYYEWAFLVAMETSHLESQLQAIKLLCHFYSTVAPNETQCV
IYNEYQLSLARKMSNKVLEGQILETISQLYLSLGTERAYRSALEYTKRSLGIFIDLQKKE
KEAYAWLRAGKIYYVLRQNELVDLYIQVAQDAALCTGDPNLGMELFEAAGDIFFNGTWEK
EKAVTFYRDRALPLALQTGNKTTELRLCNKLVELLMNLKAYEESLEYARLALVLSVKLGN
QLNERIAYHRLAAIHHHLGHCELAEHFYLKALSLCSSPLEFEEETLYYVKVYSILGDIIF
YDLKDPFDAAGYYHLALAAAMDLGNKKAQLKIYTRLAVIYHNFLVDREMSLFFYQKARTF
ATELNVRRINLAPDRCYKSS
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttggcaggtggcacatctatgctcagcactaacaccattgtccctgctctt
gagggagcgcaagacaggaacttggagagggaaggagcagagcaggaaatgtgcaggtgt
gactggaaacatgtggagagcaaagttgccatcagcaccctcagggatggagctgggatg
gacacgctgcaaaaacaaatggagtgttctccaagtgaaaaatgcatgaatgtcagttca
aggacccttcccagtcaggcagagaattttccaactgatatctccttgaagttaacaatg
gtcaaaagaaagagtggatgtcctgatcccaggctccaaagacagctcagagggcacctc
cgtcttctggaaaatgacagcaaggaggttatgactgtcttcagtgagctttctgccaga
ctcctgtctattcacagtgatcaagatttaatagtggtgacatttaaaacttttgaagaa
atatggaaatttctaacctaccactccctgggtaaagctgtttcactatacaatagttca
gcaggttttataaatcattgcatggagaatttatttctagaccagtctttctggctatat
tcccaagaggaagaagatacaggcattgaagtctgtataaacgaaaaatcattaaatttg
atgtatagaagtctgctagtacaggaaggatctttttttgttttatatcctgataatacg
ataagaaagatgatggttacagacaaagaatcaacttcttttgagactggggcttttact
gaagatgtgacagctggatctgtggatagtgacatgcccatgtggtctaatgcctccctg
gagccattggagcctttccatcagtggtttcttaaagggtattctaattccattgatttt
tcatataaaaatgaatctaaatcaatcaaaaaagttgcaatgggatccggtctagctgtg
atgaattatgaaagtattgtgtcagaagagctgagtttccaggaaggggacaaaattgag
atccttggctacttcattgaatgcatggagtggtttcttggaagacatgtgtgtactgac
caaataggttttgtaaagacaggtcatgttaaactggacttaccaagaaataaaccgcaa
catctggattttcttgaagctgaagagctatcctttttttcaaaagaaaaaaatttggaa
gaagtagtacacttgttgaaacaaacctccatcacagatgtttgctctgtgtacagaata
gatgaattagaagaacctgaatttcagaaagctcatgaatgtgaaattgcacgctcacct
tctagcccaggatccactagcaagaatggcaagatagaagaattgctgaagaacatcaag
aatttggaggccactcaagctgaagagccagctgctgaagggaaggaatctgcaggctct
acgaagactgaaatatttcctctacctgaagggccttgcttccacatatgtcaagaagat
tctcaagcatatgacatctttgagccattgttactcttcttaaataggaaagagtatgag
agcaacttcaaaagcctgtataattcctcttattcatttacaaatagcatgttttatgga
ttttcagaagaagaagaactggttaatttttttagattagcaagggaagcagcaaagaaa
gcaggtctgtcctgggcactagccaggctatgctttctcttaggcaggctcagtgtcaaa
aagctgaagttttcccaaggtcgtgtgtattttgaggaagcactgagagcagtagctgga
gagtttagtgatttgtactttgtgattgctctttatacaaatctaacagtcatctacttg
acccagaagaacaaagagaagtgtactcatatttttgacaaggctgcatctcttctcatg
ggaattcccaactacatttgcagtgctgacctggaatcagatatactgaagtatgctctg
aagaggacaattttgagccagaataaacatgcagaggcaagggcatgctttctgctggca
aaacattacagtgcacgcaaacaacaccaagaggcactgccattcttggaaagatttcag
ctgttgctcaatgacctgggtttacaaaacagtttatccaaccactgttacttcaaactg
gcagagtcctaccatgaaaagtgtttgccacacattgtacttagttgtgtaaaggttacc
tctccccagagctccagtaccttaatggattccctgaaaaggattgatttagtcatcaaa
aatgctcccagactatatggcctgagaaaactcagacaaatattcccatctcaaattgca
ccttacctcatacaagcactttcttctgtctttaccaatgaggaggaaggactgtgcagc
actatctatctcagcttagcgaagctgtacagccaccacaaacagtatggaaaagccatt
gcttacatgatgaaagcactggactctgcttctgctaggccagaggaaactatcaactat
ttggtttcacttgcttggctatacattctttacaagcagtatgaagtggctttagccatt
ttaaatgctgttgtaggctctgcatggagcagtcctcaccagcttggcattgcttacaac
atgcttgccattgctttgaaaaggacaaacaacacaaaaggagctgctgagagctactac
aaagcactgcgtctttcggaagagactgaggtgacccataaccaagccatagccctggcc
aactttggggcactctgcctgcatgcagcagccaggaagctggcagaacattattttata
agggcagttaagctattctccaagcttccaattatggactgtggtcaagattttatccaa
gtcctccttcagctgggacgttattatgttggtggaactgaaagagagaaaggaaggttt
tactatgaatgggcttttttagttgcaatggagacaagtcatctggagagtcagctgcaa
gcaattaaactgctgtgtcatttctacagtacagttgctcccaatgagactcagtgtgtc
atctacaatgaatatcaactatctttagccagaaagatgtccaacaaagttctggaggga
caaattttagaaactattagtcagctctatttgtctttaggaacagaaagggcctacagg
tcagctctggaatataccaaaagaagccttggaatatttatagatctccagaaaaaagag
aaggaggcatatgcttggctccgggcaggaaagatatattatgttctgaggcagaatgag
cttgtggatctttatattcaggttgctcaggatgctgctctttgcacgggagatccaaat
ttaggaatggaattgtttgaagctgctggagacatatttttcaatggtacttgggaaaag
gagaaagcagtgactttctacagggacagggctcttccacttgcccttcagactggcaac
aaaaccactgaactcaggttatgcaataaattggtggaattgctgatgaatctgaaggct
tatgaagaaagtctggaatatgcaagattagctcttgtcctcagtgtaaaattaggaaat
cagctaaatgaaagaatagcttaccatcgcctggcggccatccatcaccatttgggtcac
tgtgaactggctgaacacttctatttaaaggccttgtccctctgttcctctcctctggag
tttgaggaggaaacactctattatgtcaaggtgtactcaatcttaggagatattatattc
tacgacctaaaggacccatttgatgcagctgggtattaccacttggcactcgctgctgcc
atggacctgggcaataaaaaagctcaactgaagatttacaccagacttgctgtgatctac
cataacttcctcgtggatagggaaatgtctctcttcttctaccaaaaggcacgaaccttt
gcaacagagctaaatgtaaggagaataaatttagctcctgatcggtgttacaagagttca
taa
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