Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447666
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Entry
135447666 CDS
T09958
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135447666 (SOX21)
Transcription factors [BR:
zle03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135447666 (SOX21)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
135447666
NCBI-ProteinID:
XP_064568801
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Position
1:42119414..42123380
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AA seq
281 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADHEHPHGLKAGGLHAG
AAGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAASSPYSLLDLGSKMA
EISSSSSSSGSGLPYASSLGYPGAGGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYM
IPCNCSAWPGPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggatcacgtcaagaggccgatgaacgctttcatggtgtggtcgcgg
gcgcagcgacgaaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaagctgctgactgagtcggagaagcggcccttcatcgacgag
gccaagcggctgcgggccatgcacatgaaggagcaccccgactacaagtaccggccgcgg
cggaagcccaagacgctgctcaagaaggacaagttcgccttccccgtgccctacgggctg
ggcggcgtggcggaccacgagcacccgcacgggctgaaggcgggcgggctgcatgccggc
gcggcgggcgggctggtgcccgagtcgctcctggccaaccccgagaaggcggcggccgcc
gccgccgctgccgccgctcgcgtcttcttcccccagtcggccgccgccgctgccgccgcc
gccgccgcggccgccgccagcagcccctactccctgctggacttgggctccaaaatggcc
gagatctcatcttcctcctcttcctcgggctccgggttgccctacgcctcctcgctgggc
taccccggcgccggcggggcgggcgccttccatggggccgccgctgctgctgccgccgcc
gccgccgccgccggggggcacacgcactcgcacccgtcgcccggtaacccgggctacatg
atcccctgcaactgcagcgcctggcccggcccggggctgcagccgccgctggcctacatc
ctcctgccgggcatgggcaagccccagctggacccttatcccgcagcctacgccgcggcc
ctatga
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