Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447672
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Entry
135447672 CDS
T09958
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135447672 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135447672 (CSTF2)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
135447672 (CSTF2)
U7-dependent histone pre-mRNA processing factors
135447672 (CSTF2)
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GFIT
Motif
Pfam:
CSTF2_hinge
CSTF_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
135447672
NCBI-ProteinID:
XP_064568806
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Position
4A:18831333..18838714
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AA seq
618 aa
AA seq
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MEHSVPSTAGGCGAALLWLLRAQCWSGSVLLTAIPVPPTGVFQAGHQALVLSVQLLGVLG
AASPILSLVGSREAHSWHRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL
RVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQM
KLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQA
VPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQAIGGMHVNGAPPLMQPPMQGGVPAPGQMA
APVQGPGPGPMAPGGGMQPQVGMPGAGPVPLERGQGNLQLSPVGPARPASIERVQVPMPD
PRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPG
HDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRVLEARALEARGLEPRV
LEPRVLEARAMEARVLEPRGLEPRGPGPTPRGPMPGGIQGPGPLNMGASGPQGPRQVPNM
AGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQ
RQSILILKEQIQKSTGAP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagcacagtgtccccagcacagcaggtgggtgtggagctgccctgctgtggctgctg
agggctcagtgctggtcaggctctgtgctcctcactgccatccctgtgcctcccacaggt
gttttccaggctggacaccaggccctggtgctctcagttcagcttttgggagttctggga
gcagccagtcccatcctgtccctcgtggggtcacgggaggcacacagctggcacaggctg
gtgtacgacagggagacgggcaagcccaagggctatggcttctgcgagtaccaggaccag
gagacggcgctcagcgccatgcgcaacctcaacgggcgcgagttcagcggcagggccctg
cgcgtggacaacgccgccagcgagaagaacaaggaggagctcaagagcttgggcacaggt
gcccccatcatcgagtcaccctatggggaccctgtcaacccagaggacgcccccgagtcc
atcagccgggccgtggccagcctgccccccgagcagatgtttgagctgatgaagcagatg
aagctgtgtgtccagaacagcccccaggaagccaggaacatgctgctccagaacccccag
ctggcttatgcactgctgcaggcccaggtggtcatgaggatcgttgaccccgagatcgcg
ctgaaaatcctgcatcgccagaccagtgttcctcctctgatccccggcaaccagcaggca
gtgccaggcccggggcctgggccgggaccggggcctgggccagggcccaacgcgcagctg
aacccccagaacaccccatcgtcccagccacaggccataggcgggatgcacgtcaatggc
gctcctcctctgatgcagccacccatgcaggggggagtgccagccccaggacagatggca
gcccctgtgcagggcccaggccctggccccatggctccaggaggtgggatgcagccacag
gttgggatgccaggtgcagggccagtccccttggagcgtggacaagggaacctgcagctc
tcgcccgtgggacctgccaggcctgcgtctatcgaacgcgttcaagtgcccatgccagac
ccgagggcccctatgcagcgtggacctctacctgctagtggcccgccgccccgaggcctt
ttgggagatgccccgaatgaccctcgcggagggaccctgctctcagtcactggagaagtg
gagcccagaggttaccttgggccgccccaccagggagcccctatgcaccatatgcctggt
catgacagccgtggccccccccatgagatgagggggggacccatgggagaaccccgacca
ctgatgggagagccgcgggggcccttgatggatgctcgagtcggaagagatccgcggggg
ctggagccgcgcgtgctggaggcgcgggcgctggaggcgcggggcctggagccgcgggtg
ctggagccacgagtgctggaggccagggccatggaggccagggtgctggagccacggggc
ctggagccccgagggcctggtcccaccccgcggggcccgatgcctggtgggatacagggt
cctgggccgctgaacatgggagccagtggcccacaggggccccgccaggttcctaacatg
gctggggcaggcatgcagggaggaggcatacctggggcaggagtccaaggagctggtcag
cctggaggctttagccctggacagagccaggtcaccccccaggatcatgagaaggcagcg
ctgatcatgcaggtcctgcagctgacagcagaccagatcgccatgctgcccccagaacag
cggcagagcatcctcattctgaaggagcaaatccagaaatccacaggggcaccctga
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