Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447683
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Entry
135447683 CDS
T09958
Symbol
GPC6
Name
(RefSeq) glypican-6
KO
K08112
glypican 6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
zle00535
]
135447683 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zle00537
]
135447683 (GPC6)
Proteoglycans [BR:
zle00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
135447683 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zle00537
]
Others
135447683 (GPC6)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
PAF-AH_p_II
Motif
Other DBs
NCBI-GeneID:
135447683
NCBI-ProteinID:
XP_064568843
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Position
1:complement(42236476..42963286)
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AA seq
642 aa
AA seq
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MCACARPSPPRLAKVCLGGRGAPGPPPPQPGGAAEARRSGGGGGAGLARRAGVALRAMPA
ARGAARRCALAGPPLPVPPPPLLLLLLVLLVLPVLPAAGTEGKARSCGEVRQAYSAKGFS
LASVPYQEIAGEHLRICPQEYTCCTSEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHK
KFDEFFRELLENAERSLNDMFVRTYGMLYMQNSEVFQDLFAELKRYYTGGNVNLEEMLND
FWARLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFGDVPRKLKVQVTRAFIAARTFVQ
GLTVGREVANRVSKVSPTPGCIRALMKMLYCPYCRGLPTVKPCNNYCLNVMKGCLANQAD
LDTEWNLFIDAMLLVAERLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQ
PKPAPALRSSRSVPENFNTRFRPYIPEERPTTAAGTSLDRLRTIWRTMQHGVTDIKEKLK
LSKKFWSTLPYTICKDERVTAGPSVEEDCWNGHTKARYLPEIMNDGLTNQINNPEVDVDI
TRPDTFIRQQIMALRVMTNKLKNAYNGNDVNFQDTSDESSGSGSGSGCTDDICPTEFDFV
TTEAPPVDSDRREVEASATQPGCSLQTLLLIFLSLLLQRQWR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgtgtgcgcgcccatctcccccccgcctcgcaaaagtttgcctgggcggccgg
ggggctcccgggccgccgcccccgcagccggggggcgcggcggaggcgcggcggagcggc
ggcggcggcggcgcgggacttgcgcgccgcgcgggagttgcgctccgcgccatgccggcg
gcgcggggggctgcgcggcgctgcgccctggcggggccgccgctgccggtgccgccgccg
ccgctcctgctgctgctgctggtgctgctggtgctgccggtgctgccggccgcggggacc
gagggcaaggcgcggagctgcggcgaggtgcggcaggcgtacagcgccaagggcttcagc
ctggccagcgtgccctaccaggagatcgcaggggaacatttgagaatctgccctcaggaa
tatacatgctgcacctcagaaatggaggacaagttaagccaacagagcaaactggagttt
gaaaacttggtggaggagacgagtcactttgtacgcacgactttcgtatcccggcacaag
aagtttgatgagtttttccgagaactcctggagaacgcggagcgatccctgaacgacatg
tttgtccggacgtacggcatgctctacatgcagaactctgaggtgttccaggacctcttc
gccgagctgaagcgctattacacgggaggcaacgtcaacctggaggagatgctcaacgac
ttctgggctcggctgctggagcggatgttccagctcataaacccccagtaccacttcagt
gaggactacctggagtgtgtgagcaagtacacggaccagctgaagccctttggagatgtg
cccaggaagctgaaggttcaagtgactcgagcattcattgctgcccgcacctttgttcag
gggctgacagtaggaagagaggttgcaaacagagtgtccaaggtcagtcccaccccaggg
tgcatccgggcgttaatgaagatgttgtactgcccttactgcagaggacttcccactgtg
aaaccttgcaacaactattgcctcaatgtaatgaagggctgcctagcaaatcaggctgat
ttggatactgagtggaatctgttcatagatgctatgcttctggtagcggagagattagag
ggaccattcaacattgaatcagtcatggatcctattgatgtcaagatttctgaagccatc
atgaacatgcaagagaacagcatgcaggtgtcagcaaaggttttccaaggatgtggccaa
ccaaaaccagcacctgccctgagatcttcccgttctgtccctgaaaacttcaatacccga
tttagaccatatatcccagaggagagacctacaactgctgctggcacaagcttggatagg
ctgaggactatctggaggacaatgcaacatggtgtaacagacattaaagaaaagctaaag
ctctctaaaaagttctggtcaaccctgccctacacaatctgcaaggatgagcgggtgaca
gcgggtccgtccgtcgaggaggactgctggaatggccacaccaaggcgagatacttgcct
gagattatgaacgatggcttgacgaaccagatcaacaatccagaagtagatgtggacatc
acaaggccagacaccttcatacgacagcaaatcatggccttgcgtgtcatgactaacaaa
ctgaagaacgcgtacaatgggaatgatgtcaacttccaggacacaagtgacgaaagcagc
ggctcaggcagcgggagtggctgcacagatgacatctgccccaccgagtttgactttgtc
accaccgaagcgccgcctgtcgactcggacaggagggaggtggaggcttcagccacacag
cctggctgctcactgcagacattgctcctcatcttcctcagcctcctactgcagagacag
tggagataa
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