Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447687
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Entry
135447687 CDS
T09958
Symbol
RBMX
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135447687 (RBMX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zle03041
]
135447687 (RBMX)
Spliceosome [BR:
zle03041
]
Common components
Common spliceosomal components
hnRNP proteins
135447687 (RBMX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
RRM_5
RRM_occluded
PHM7_cyt
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
135447687
NCBI-ProteinID:
XP_064568842
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All DBs
Position
4A:19546993..19557560
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AA seq
385 aa
AA seq
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MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGAR
GPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGG
PPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSR
DEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYG
GSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSS
SSRGAPRGGGRGGSRSDRGGGRSRY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagcagatcgtcctgggaagctgttcattgggggcctgaacacagagactaat
gaaaaagcccttgaggctgtattcggcaaatatggacgcattgtggaagtccttttgatg
aaagatcgggaaacgaacaagtccagaggatttgcattcgtcacgtttgagagtccagca
gatgcaaaagatgctgccagagatatgaatggaaagtcattagatgggaaggcaattaaa
gtggaacaagcaaccaagccatcctttgaaagtggtggtaggcgtgggccaccaccccct
ccccgaagcagaggtcctcccaggggccttagaggcgcaagaggcggaagtggcgcgaga
ggaccaccttcaagagggagtcacttggggtcttctcgagggccactccccatgaagagg
ggcccacctccacgaagtggaggccctccacctaaaagatctgcaccttcaggaccagtg
cgtagcagtagcatgggaggaagagctcctgtgtcacgtggaagagatggttacggtggt
cctccacgcagagagccaatgccatcacggagagatgtctacatgtctccaagggatgat
ggctacagcactaaagacggttattcaagcagagattatcccagttccagggatacccgg
gactacgcaccacctccacgagactacgcatatcgtgattatggtcattccagctcacgt
gatgaatacccctccaggggatatagtctttcctcctatagcgatcgtgatggatacggt
ggtgggcgtgacagagactactcggatcatccaagtggaggctcctacagagattcatat
gagagttacggtaactcacgtagtgctccacctgctcgagggcccccgccatcatatggt
ggaagcagtcgctatgatgattacggcagcacacgagatggatatggaagcagagaaagt
tactcaagcagcagaagtgatgtctactcaagtggccgtgatcgtgtgggaagacaagac
aggggtcttcccccatccatggaaaggggctatccacctcctcgggattcttacagtagt
tcaagccgtggggcgcccagaggtggtggccgtggtggaagcagatccgatagaggtgga
ggcagaagcagatactaa
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