Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447688
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Entry
135447688 CDS
T09958
Symbol
ARHGEF6
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04518
Integrin signaling
zle04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
135447688 (ARHGEF6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135447688 (ARHGEF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135447688 (ARHGEF6)
Membrane trafficking [BR:
zle04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135447688 (ARHGEF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
CH
SH3_9
SH3_1
PH
RhoGEF67_u1
SOS1_NGEF_PH
YRF11-like_helical
Nmad5
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
135447688
NCBI-ProteinID:
XP_064568850
LinkDB
All DBs
Position
4A:19565210..19602938
Genome browser
AA seq
773 aa
AA seq
DB search
MNPEEQIVTWLISLGVLNSPKKIVDDPEGFLKTSLKDGTVLCKLINRLLPGSAEKFCLEP
KNEADCISNIQEFLKGCALLKVEVFDPHDLYTGDQFSKVLSTLTAVNKATEDQLSKGPCS
HLSSLNSTAGDPQSDSTSTASQSARVLRRQSKPVEMTENGSHQLVVKARFNFKQTNEDEL
SVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQMTK
NYYPVVLQNILETERDYAKELQSLLGTYLRPLQSCDKLSTGDTAALLGNMEEISAFQQTL
NQALEEVAKLPENQQHVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQ
GAASPGILILTTSLSKPFLRLDKYVTLLQELERHMEEAHADHEDVLKAITSFKSLVSQCQ
ELRKRKQLELQILSESIQRWEGEDIKMMGNVVYMSQVMVQSGGSEEKEERYFLLFSNVLL
MLSASPRMSGFIYQGKLPLTGMMLTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEW
LDHLQRLTKGTCRTISKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPS
AALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVI
EAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKD
EVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaagaacagattgtaacgtggcttatttcactaggagtcttaaattcccct
aagaaaatagtggatgatccagaggggttcctgaaaacctctctgaaagatggaactgtg
ctttgcaaactcattaatcggcttcttccgggatctgcagaaaagttttgcctggagcct
aaaaatgaagctgattgcatcagtaatattcaagagttcttgaaaggctgcgcacttctg
aaagtggaggtgtttgatccacatgatttatacactggagatcagttctccaaggtcctg
agcacattaacagctgtaaataaggctactgaagatcagctgtcaaaagggccatgttca
catctttcctctcttaactccacggctggagacccccagagtgactccaccagcacagct
tcccagtcagcaagggtgttacggaggcagtccaagcctgtggagatgactgagaatggc
agtcaccagctggtggtaaaggccaggttcaattttaagcagaccaatgaagatgaactc
tctgttaacaaaggagacattatttatgtcactcgagttgaagaagggggctggtgggaa
ggcaccttgaatggaaaaacaggctggttcccaagcaactacgtcagagaaatcaaatct
actgataaaccactctctcccaaagcattgaaagggctagaaaacactcagatgacaaag
aattattaccctgtggtgttgcaaaatattctggaaacagaacgagattatgcaaaggaa
ctacagtcacttctgggaacttacttaagacccctccagtcttgtgataagctcagcact
ggggacacggcagcattgctgggaaacatggaagaaatctctgcttttcagcaaacactg
aaccaagccttggaagaagttgcaaagctccctgagaaccagcagcatgtgggaggctgt
ttcatgaacctgatgccccagttccgctccctgtacctgacgtactgtgctaaccaccct
tcagcagtgaatgtcctcacacagcacagtgatgagctggagaagttcatggagagccaa
ggtgcggccagcccaggcattctcatcctgaccacaagcctcagcaaacccttcctgagg
ctggataaatacgtgacactgctgcaggagctggagcggcacatggaggaggcgcatgca
gatcatgaagatgttttgaaagccatcacgtccttcaagtcccttgtgtcacaatgccag
gagttgaggaagaggaaacaacttgagctgcagatcctttctgaatccatccagcgctgg
gaaggagaggacataaaaatgatgggaaatgtcgtctacatgtcccaggttatggtgcag
tctgggggaagtgaggagaaagaggagcggtatttcttgttattttctaatgttttgctg
atgctgtctgcaagcccacggatgagtgggttcatctatcagggaaagctgcctttgaca
ggaatgatgctgacaaagctggaagatgccgaagggaatgagcacatgtttgaaatcaca
gggaacatgatggagcggatcactgtgtcctgcagcaccagccaggacttgcacgaatgg
cttgaccacttgcaaaggctgaccaaagggacatgcaggaccatctccaaaacacagtcc
tggagtcctcattcaacatttagttcagctgggcagatccgtgggcctctggaacccccc
aaaatcctcaagccctggagcttgagctgcctccgtcctgctcctccactcagaccttca
gcagcactgagttacaaagagaggatgtcttatatcttaaaggattctagcaaaagtcca
aaaacaatgaagaagtttcttccaaaaaggaaaactgagagaaaaccatctgatgaagag
tttgttattcggaaaagtactgctgcgctggaggaggatgctcagatcctgaaggtgatt
gaggcatactgtactggggcaggcttccagcaagctctcagctcaggctcccgtaaagac
tccatcccccaagtccttcttcctgaggaagagaaaatcatcatagaggagacacgaagc
aatggccagacggtcacagaggaaaaaagccttgttgatacagtttatgcactgaaagat
gaagtcaaagagctgaagcaggaaaacaaaaggatgaaacagtgtttggaggaagagctt
aaatcccggaaggacttggagaagctggtgagaaggctgctgaaacagacagatgagtgt
ggcagggaggacaccgggcgcaagtcatccctgatcgcttga
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