Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447707
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Entry
135447707 CDS
T09958
Name
(RefSeq) transcription factor SOX-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135447707
Transcription factors [BR:
zle03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135447707
SSDB
Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135447707
NCBI-ProteinID:
XP_064568865
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All DBs
Position
4A:3356968..3358838
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AA seq
318 aa
AA seq
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MYSMLETEIKAPQPTPGSTGGNPAPGSTGKGGGGGGAGNGAGAGSDQDRVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYR
PRRKTKTLLKKDKYSLPGNLLAPGGGNAVSSPVGVGQRIDTYAHMNGWTNGAYSLMQDQL
GYSQHPGMNSPQLQQMHRYDMTGLQYSPMMSTAQTYMNAASTYSMSPAAYGQQPSTAMSL
GSMGSVVKSEPSSPPPAITSHSQRACLGDLRDMISMYLPPGGDATDPSALQGSRLHSVHQ
HYQSAGTAVNGTVPLTHI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggagacggagatcaaggcgccgcagcccacgccgggcagcaccggg
ggcaaccccgctccggggagcaccggcaaaggcggcggaggcggcggggccggcaacgga
gcgggagcgggctcggaccaggaccgggtgaagcggcccatgaacgccttcatggtgtgg
tcccgcgggcagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatc
agcaagcgcctcggcgccgactggaagctgctgagcgacgccgagaagcggcccttcatc
gacgaggccaagcgactgcgggccgtgcacatgaaggagtatccggattacaaataccgg
ccccggaggaagaccaagaccttgctgaagaaggacaaatactcgctgcccggtaacctg
ctggccccgggagggggcaacgcggtgagcagccccgtcggggtggggcagaggattgac
acttatgcccacatgaacggctggaccaacggggcttactcgctgatgcaagaccagctg
ggctacagccagcacccgggcatgaacagcccgcagctgcagcagatgcaccgctacgac
atgacgggcctgcagtacagccccatgatgtccacggcccagacctacatgaacgccgcc
tccacctacagcatgtcccccgccgcctacggccagcagccctccacggccatgagcctg
ggctccatgggctccgtggtgaaatccgagcccagctcgccgcccccggccatcacttcc
cactcgcagagggcctgcctgggagacctgcgggatatgatcagcatgtacctgcccccc
ggcggggatgccacagacccttccgcgctgcagggcagcaggttacacagcgtgcaccag
cactaccagagtgccgggactgccgtcaatggtaccgtaccactaactcacatatag
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