Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447805
Help
Entry
135447805 CDS
T09958
Symbol
RPGRIP1L
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zle01009
]
135447805 (RPGRIP1L)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zle03037
]
135447805 (RPGRIP1L)
Protein phosphatases and associated proteins [BR:
zle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135447805 (RPGRIP1L)
Cilium and associated proteins [BR:
zle03037
]
Primary cilia and associated proteins
MKS complex
135447805 (RPGRIP1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
NGO1945_C
Motif
Other DBs
NCBI-GeneID:
135447805
NCBI-ProteinID:
XP_064568945
LinkDB
All DBs
Position
4A:78091..119585
Genome browser
AA seq
1047 aa
AA seq
DB search
MPVSADETVGNLAVRDTVLTPAGIEGLQESSSTQNVKARQVISRIGREELEDRFLRLRDD
HILLKQYANKQEEKIKRMTTKLIRLVNDRRKCDQAGSGPKRLGQALELEEMIEHLREKVC
ELEKQNESLRNKLISTKQQLQIQGHRPCQYSSVQSRVNTGLKKESETAGMPEHTKKGMRF
QGLEVRSSDLVLPKYGQSLLEDSRAEIRNLETVIESQKNQIEELDRAREILGNQLRRKEK
EIEESTLRLKEQGTASQRLNIQDNVEMIKVRKQLAEKSNALSAMEGKFLQLEENLKNLKT
NHDALLAKGDELNVQLKEERLKCFHLQKELQTVTISNRRTEELQERINDLENENKLLKEN
YDKLHNSVFSLPHEQQWKSKEQQLKLQIAKLEAAIKNDLADKNEILDKIKVERDQKEKLM
QDNKDLQLRYLEQKQQLDDLKNQVKCLTKDRKQQKNVDLLFLEKVEDDIHKDVEYSMQEL
QLTHVETVQELEKTRNLLLVQHKISKNYQTEVETMTRKMESLQKDYELKLEQYTHLLDIR
AARIRKLEAQLGDIVYDTKPLKSRQEVLLNDPVCGFVETVHLERGENLFEIHISKVIFSS
EAMHTFGDWEPATFCTYAFYDFELQITPVVHGKTPSYDFTSQFLVQSDDSFFHYIQENSI
TLEVHRAYGIDYETIASCQLKFQEILEKEGKIYNTANLVGKTGHIQNYGTVEYWIRLQVP
MDQAILPYKQRSKDLGYGIMPSFRKHEQPSKTPTLKMKHRAAQAHKRVSFLDLSAVQMAH
VVQDAKQLLGDKVKDMAEEIQQEKEELSHLSEEQLADLTLVTSRDETEIIEELEPEGQED
HQEDDAVESIKTDSDDCIISSPVSTNIKQLSQSIHGNYLEVEKIQIKITSLGLTESRITA
DETIQQLFVECRLNNFLAEETPLSLPKPPSGQRIHYNYSTAINVDKEDNHAEREYLKSIL
LKPDLPADSLKFTVVSDPPEDEQDLECEDIGFAYVSLKEIFQKQRDIIEQDIDVFDSQDA
SAVIGKLTVTVEALNALRSVHEECKND
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttcagctgatgaaactgtggggaaccttgctgtgagagatacagtccttact
ccagctggaattgaaggattacaagaatcatcatctacacagaatgtaaaagctcgacaa
gtcatatcaagaatcggtcgagaggaactggaggacagatttcttcgtctacgtgatgac
catatcctactcaaacagtatgccaataagcaagaggagaaaattaaaagaatgaccacc
aagttaatacggctcgttaatgatagaagaaaatgtgaccaggctggctctggacccaag
cggctgggtcaggctctggagctggaagaaatgattgagcatttgcgagaaaaagtctgt
gagcttgagaaacaaaatgagagcctccgcaacaaactcatttcaactaaacagcagctc
cagattcaaggccataggccttgtcagtacagctccgttcagtctcgtgtgaacactggt
ctgaaaaaagagagtgagactgctggcatgccagagcacaccaagaagggaatgagattt
caaggtttagaagtgagatcatctgaccttgtgcttcctaaatatggacagagtctgctc
gaggattcaagagctgaaatcagaaatttggagactgtcattgagtcccaaaagaaccaa
attgaggaattagaccgtgccagagagattcttgggaatcaactaagaaggaaagaaaag
gaaattgaagaatccaccctacggctgaaagagcagggtacagcaagccaaaggctaaac
attcaggacaatgtggaaatgatcaaagtccgtaaacagctggctgagaaaagcaatgct
ctttcagcaatggaaggaaagtttctccagcttgaagagaacctaaagaacttgaagacc
aaccatgatgctttattagcaaaaggtgatgaactgaatgttcagcttaaagaggagcgg
ttaaagtgctttcatcttcaaaaagaattgcagacagtaactatttcaaacagaaggaca
gaagagttacaggaaagaataaatgatctagaaaatgagaacaaactgttgaaggaaaac
tatgataagctgcataacagtgtcttcagtctgccccatgaacagcagtggaagtcaaag
gaacagcaactgaaactgcaaattgctaaactagaggcagctatcaaaaatgatctagca
gacaaaaatgaaatccttgacaagatcaaagtagaaagagaccaaaaggaaaagctgatg
caagacaacaaagacctgcagttgcgctacctggaacaaaaacagcaactagatgatctg
aaaaatcaagtgaagtgtttaaccaaggatagaaagcaacaaaagaatgtggaccttctg
ttcttggaaaaagtggaagatgatatccataaagatgtagaatactccatgcaggagctg
cagttaacacatgtggaaactgtgcaagaacttgaaaagacaaggaatttgttacttgtg
cagcataaaattagcaaaaattaccagactgaagtagaaacaatgacaagaaagatggaa
agtctacagaaagattatgagttaaaattggaacagtatacccatcttctcgatattaga
gctgcacgtatcagaaaactagaagcccaactaggagacattgtgtatgatacaaaacca
cttaagtccagacaagaagtattgctgaatgatccagtgtgtggatttgttgaaactgtt
catttagaaagaggagagaacctttttgaaattcatatcagcaaagtgatcttctcttct
gaagctatgcacacttttggtgactgggaacctgcaaccttttgtacttacgcgttctat
gactttgaacttcagataaccccagtagttcatgggaagaccccatcatatgacttcact
tctcagttccttgtgcagtctgatgatagcttctttcactatatacaggaaaacagcatc
acactggaggttcatcgtgcgtatggcatagattatgaaacaattgcttcttgtcagctt
aagttccaggaaatcttggaaaaggaaggcaagatctacaacacagcaaatttagttgga
aaaacaggacacattcaaaattatggtactgtagaatactggatcaggttgcaagttcct
atggaccaagctattcttccctacaaacagaggtcaaaggatctgggatatgggataatg
cccagttttaggaagcatgaacaaccatccaagactccaacactcaaaatgaagcatcgt
gcagctcaagcacacaagagagtctcttttctggatcttagtgcagtacagatggcacat
gtggtgcaggatgctaaacagctgttgggtgacaaagtgaaggacatggctgaagaaatt
cagcaggaaaaagaagagctttctcatctgtcagaggagcaattggctgacctaacattg
gttacttctagagatgagacagaaataattgaagaattggaaccagaaggtcaagaagat
catcaagaggatgatgctgttgaatcaataaaaactgatagtgatgactgtattatttca
agtccagtatccacaaatattaaacagctgagtcagagtatacatggcaattatttggaa
gttgaaaaaatccagattaaaattacatcacttggtcttactgagtcacgaataacagca
gatgaaacaatacagcagctgtttgtagaatgcagattaaacaatttccttgcagaggag
accccactgtcacttccaaaaccacctagtggtcagagaattcactataactatagcact
gcgataaatgtagataaggaagataatcatgcagaaagagagtatctcaagtcaattctt
ctaaagccagatctacctgctgacagcctaaaatttacagtggtcagtgatcctccagaa
gatgagcaggatcttgaatgtgaggacattggatttgcttatgtcagtttaaaagagata
ttccagaagcaaagagatatcattgagcaagatattgatgtttttgattcacaagatgcc
agtgcagtaattggaaagctcacagtgacagtggaagccctcaatgcactgcgttcagtc
catgaagaatgcaaaaatgattag
DBGET
integrated database retrieval system
