Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447840
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Entry
135447840 CDS
T09958
Symbol
RBM26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zle01009
]
135447840 (RBM26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135447840 (RBM26)
03041 Spliceosome [BR:
zle03041
]
135447840 (RBM26)
Protein phosphatases and associated proteins [BR:
zle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135447840 (RBM26)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
135447840 (RBM26)
Spliceosome [BR:
zle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135447840 (RBM26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PWI
Nup35_RRM_2
RRM_Nup35
zf-CCCH
zf_CCCH_4
RRM_3
COG5_N
Med15_M
Motif
Other DBs
NCBI-GeneID:
135447840
NCBI-ProteinID:
XP_064569036
LinkDB
All DBs
Position
1:48688631..48735739
Genome browser
AA seq
1019 aa
AA seq
DB search
MVVKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCVDQLDVF
LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQEKEAKKEEIAKEEEREKKF
SRRLNHSPPQSSSRYRDTRSRDERKKEERSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
RSRSRSWSKERLRDRDRDRSRSRSRTRSRERDLGKPKYDMDRTDPLENNYTPVSSVTNIS
SGHYPVPTLSSTITVIAPAHHGNNTTESWSEFHEEQLDHNSYGRPPLPKKRCRDYDEKGF
CMRGDMCPFDHGSDPVVVEDVNLPGILPFPAQPPVVEGPPPPGLPPPPPILSPPPVNLRP
PVPPPGPLPPSLPPVTGPPPPLPPLQPAGMDAPPNSATSSVPTVVTTGIHHQPPPAPPSL
FTAGVVLRLCPQETYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPRE
KPPNKSSMRIVVDAESRKRTIGAGDGGVPTKKTWFDKQNFNRTNSPGFQKKVQFGNENTK
LELRKVPPELNNISKLNEHFSKFGNLVNLQVAYQGDPEGALIQFATHEEAKKAISSTEAV
LNNRFIKVYWHREGSAPQIQTTAQKVIQPLVQQPTLPVVKQSVKERLGPVPASNIEPAEA
QGANAEVAQNVTKLSVKDRLGFVSKPVTPTTEKVLSTSTGLTKTVYNPAALKAAQKSLPV
VSTSVLDSNEAQKKKQEALRLQQDVRKKKQEILEKHIETQKMLISKLEKNKAMKSEDKAE
IMKTLEILTNSITKLKDELKGVSPGGGPPLKSMKTKTQMQKELLDTELDLYKKMQAGEEV
TELRRKYTELQLEAAKRGILSSVRGRGVHARGRGAARSRGRGIRGRGRGRGVPVHAVVDH
RPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAIHGSRF
KGQELKLAWNKPVASMSAVETEEAEPDEEEFQEESLVDDSLLQDDDEEEEENESRSWRR
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtggttaaaatgatcatagaaaacttcgaggcgctgaaatcctggctcagcaaaacc
ttggagcccatatgtgatgctgatccatctgccctagctaaatatgttctggctttggta
aagaaggacaaaagtgaaaaggaactgaaggcattgtgtgttgatcagctggatgtattt
cttcagaaagaaactcagatatttgtggaaaaactgtttgatgctgtgaatacaaaaagc
tacctacctccaccagaacagccatcatcaggaagcctgaaagtagaattttttcagcac
caagaaaaggaggcaaaaaaggaggagatcgctaaagaggaagagcgagagaaaaagttc
tccagaaggttaaatcacagccctcctcagtcaagttctcgctacagagacaccagaagc
cgtgatgaaaggaaaaaagaggaacgttctcggaagagggattatgaccgaaatcctccc
agaagagattcctacagggatcgatacaacagacggagagggaggagtcgcagctacagc
aggagccgaagtaggagttggagcaaagagaggttgcgggaccgtgatcgggaccggagc
agaagccggagcagaacgcgaagcagagaaagggatttaggaaagccaaaatatgacatg
gatagaacagatccattagagaacaattatactccagtttcttctgtgacaaatatttca
tctggccactaccctgtccctacactgagcagtactattactgttattgctcctgctcat
catggaaataacactactgaaagttggtcggagttccatgaagagcagctggaccacaac
tcctatggaagacctccgctgccaaagaaacgctgtagagattatgatgagaagggtttc
tgtatgagaggagacatgtgcccttttgatcatggaagcgatccagtagtggtagaagat
gtgaatcttcctggcattctgccttttccagcacagccccctgttgtcgaaggaccacct
cctcctggacttcctccccctccaccaattctcagtcctcctcctgttaaccttagacct
ccagtaccaccaccaggccccttaccacctagcctcccacctgtaacaggaccaccccct
ccccttccgccactgcagcctgctggcatggatgcccccccaaactcagccaccagctca
gttcctaccgttgttaccacgggtattcatcaccagccgcctcctgctccaccctctctt
tttacagcaggtgtagtactgaggctttgcccacaagaaacgtatgacacagatggctat
aatccagaggctccaagtataacaaatacttcaagacctatgtatagacatagagtacat
gcccaaagaccaaatttgataggactcacatcaggtgatatggatctaccacccagagaa
aaacctcctaataaaagtagtatgagaatagtggtagatgctgaatccaggaaaagaaca
attggtgcaggggatggtggagttcctacaaagaagacttggtttgacaagcaaaatttt
aacagaacaaatagtccaggtttccagaagaaagtgcagtttggaaatgaaaatacaaaa
cttgaattgagaaaagttccaccagaacttaacaacatcagcaaacttaatgagcacttc
agtaagtttggaaacttagtcaacttgcaggttgcatatcagggtgatccagagggtgcc
cttattcagtttgccacccatgaggaagcaaagaaagctatatcaagtacagaagcagta
ttaaataatcgttttattaaagtttattggcatcgagaaggcagcgcaccgcaaatccag
actactgcacagaaggtgatccagcccttggtgcagcagcccactttgcctgtagtgaag
cagtcggtgaaggagcggctcggcccggtgcctgcgagcaatattgaacctgcagaagca
cagggtgccaacgcagaagtcgctcagaatgtgactaaattatctgtgaaggatagactg
ggttttgtgtcaaagccagttactccaacaactgaaaaggttttatctacttctactggc
ttgacaaaaactgtgtacaaccctgctgctttgaaggcagcacagaaatctttgcctgtt
gtttccacttccgtgctagactctaatgaagcacagaagaaaaaacaggaagcactgcga
cttcaacaagatgtgaggaaaaagaagcaagaaatcttggagaagcacattgaaacacag
aagatgctgatttcaaagctggagaagaataaagccatgaagtcagaagacaaggcagaa
atcatgaaaacactggaaattttgactaatagcattaccaagttaaaggatgaattaaaa
ggtgtatcaccaggaggagggcctcctttaaaaagcatgaaaactaaaactcagatgcag
aaggaattactagatactgaactggatttatacaagaagatgcaagctggggaggaagtt
actgaattaagacgaaaatatacagagctgcagctggaagctgccaagcggggcattctc
tcctcggtgcgcggcagaggggttcacgccagaggccggggcgcggcgcgcagcagaggc
agagggatccggggccgcggcaggggcaggggcgttcctgtgcacgccgtggtggatcat
cggccccgggcgctggagatctccgccttcaccgagagcgacagggaagatcttctgccg
cattttgcgcaatatggtgaaattgaagattgccagatagatgactcttctctccatgcg
gtgattacttttaaaacaagagcagaagctgaagctgctgcaattcatggatctcgtttc
aaaggacaagagctaaagttggcatggaacaagcctgttgctagtatgtcagctgttgaa
acagaagaagctgaacctgatgaagaagaatttcaggaagaatctttggtggatgactca
ctgcttcaagatgatgatgaagaggaggaggagaatgaatctcgttcgtggagaagatga
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