Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447875
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Entry
135447875 CDS
T09958
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135447875 (RLIM)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135447875 (RLIM)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135447875 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
135447875
NCBI-ProteinID:
XP_064569122
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All DBs
Position
4A:complement(2176392..2189409)
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AA seq
595 aa
AA seq
DB search
MESSDSGDKGSIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSNGEDLENSQSDSEIPRS
ESPSVRQPGSERSSAEELTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINAVSEAP
RRSHHNTSSQTPDHSSAGEAEGSSRTRQHVTLRQHTVGTEVPSENAVLFAPPETRPAPQA
AGSSESTGASESAAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDNSADSGGSTPFHHLETAEPQSGGGGASGNENADVSSGEVYEGGHEASSTSGARR
EGRNMRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKT
CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctggtgataaaggaagtattgatcagtcagaagcccaacgtcag
agccagctggatcggttagaccgagaggaggctttctatcagtttgtgaacaacctgagt
gaagaggactacaggcttatgagagataacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtctgcagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagactggaaatacgacacggagcgggcagcgaggaaaccag
tcctggagagcagtgagccggactaacccaaatagcggcgacttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacacgaatccagaaactgagaatgagccatctgta
gagccttccaatggggaggatttggaaaacagccaaagtgactctgaaattccaaggtct
gaatcaccatctgtaaggcagcctggatcagaaaggagcagtgcggaggagctgacagct
gaggaggcttcccctcctagagggcagaggagagccaggagtaggagtcccgagcagcgg
cggacgcgggctaggactgatagaagtaggtcacctatcaatgcagtgagcgaggcccct
cgcaggtctcatcacaacacatcatctcaaacacctgaccactcctcagcgggcgaggct
gagggcagctctagaaccaggcagcacgtgacgttaaggcagcacacagtggggactgag
gtgccaagtgaaaatgcagttctgtttgccccccctgagacgaggcctgctcctcaagca
gcgggttcttcagaaagcactggtgccagcgagtccgcggctcctgggcagaggcctccc
accatagtgctggacctgcaggtgagaagagttcgcccgggcgagtaccggcagagggac
agcatcgccaacaggacccgctcgcgctcccagacccccaacaacacggtcacctacgag
agcgagcgcggcggcttccggcgcaccttctcccgctcggagcgcgccggcgtgagaact
tacgtcagcaccatcaggatccccatccgcaggatcctgaacacgggcctgagcgagacc
acgtcggtcgccatccagaccatgctgaggcagatcatgacgggcttcggggagctcagc
tacttcatgtacagcgataacagtgcagattccggtgggtcgactccctttcaccacttg
gagactgccgagccgcagagcggaggcgggggcgcctcgggcaatgagaatgcagatgtc
agctcaggggaggtgtacgagggtgggcacgaggccagctcaacatctggtgccaggcgg
gaaggccgcaatatgaggggatcggtcacttttgaagaaagcggttctctaccattcctt
agccttgcacagtttttcttactcaacgaagatgacgatgaccaacccagaggactcacc
aaagaacaaattgacaacctagccatgaggaattttggtgagagcgacgctctgaaaacc
tgcagcgtgtgcatcaccgagtacacggagggcaacaagctccgcaagctgccgtgctca
cacgagtaccacgtgcactgcatcgaccgctggctgtccgagaactccacctgccccatc
tgccgcagggcagtgctggcctctgggaacagggagagcgtggtctga
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