Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447884
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Entry
135447884 CDS
T09958
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135447884 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135447884 (ATRX)
03036 Chromosome and associated proteins [BR:
zle03036
]
135447884 (ATRX)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
135447884 (ATRX)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
135447884 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
135447884
NCBI-ProteinID:
XP_064569131
LinkDB
All DBs
Position
4A:complement(2666537..2737905)
Genome browser
AA seq
2442 aa
AA seq
DB search
MTAEPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNKSIGKSREPKGSPASMENN
RDEGSSSSERTKSLGSSRSKRKPTVVTKYVGSDDEQIADETVNEDISNENSENDVDMQSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKMK
VENEKNKTYDHTVKFSPKKNNANCNGEEKKLDNSYSGSLTYSYKALMVPKDLLKKTKKLI
ETTTNLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLNDMKKAHLSLEEGLNLEIQAL
NVKIKDKNTKEKKTEVRSEKNEVKKDEGKEHAALKEDDAAQTQKKVVSERPDNEPMDQSV
PSVEQTDNKAAPGEEKKSGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQ
MPSDEQDSGNTAADHEAPNSNTKANAPVKDTKGGTKLKSSAKGTKELIVKLTPVSLSEST
VKSDDQDNSLEKDSKDADASKDADASKDIDESKAVDASQPGAANSESGKQNHSAGSEAST
ENDAVPAEDSDLRRSPRVKTTPLRRPTDISPLTSNSEEDSNDTSNEKPKRKASKQPRRKS
DKRNASDSAADGPGPNKLSKCKKPYELDHSSDSDEVPAVLKEAGMMSRSSSDSESNSEAP
AKNQKTSDLQKSQPVKDENGKRKRKSSSSGSDLDAKRGKSAKNAAAAKKKRQNYSDSSNY
DSELEKEIQMLSKIEAAKKSKKFSRKDDSYDSSEEEQGKKVSSKRKLNLKKKRGKSSEED
DDGEKSSAEKETNHSSKDKKTGKRSAAKDKLSRDSKEKSAKGKRDESSDAEKSSLEKEEG
PEVKKKKDLKKKKAQDDSSSESTEKSAKKEHKLESSKDRLKNKKGSESKAKKSEKLKKKG
FKKDQDDSSSDLDKSSAERGSSNSSENDKIKKEPVFTEKRKLRERVAKRVHIDLSSDTEK
SPQKEESSDDDAVRRKKRTDTKEKRKISHKKKISKKEQDDSSSSDEESYEDTKKKVKRGS
VKENKKSNLKKKVAKKKAVVTSSSPSDKEENDDQNSTGDGSSDEQKIRPVTESLMLSADG
GFCQSSGDEGDALSRTIPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDTSSDEQPE
EGKKKPTKQTESTADDGEKEKEDKKAEKEEDNSEDSDSEEEETSKKPRYRHRLLRQKLTV
SDGESGEEKKVVKPKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVTESEDDQRPRTR
SAKKAEAEENQRSYKQKKKRRRIKVQEDSSSENENKSNSENEDNDDSKSPGKGRKKIRKI
IKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDE
ETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQ
VVSFLHTVLLCDKLDFRTGLVVCPLNTALNWLNEFEKWQEGLEDEEKLEVYELATVKRPQ
ERSYMLQQWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHI
LKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINP
IQNGQCADSTPVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQ
CKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFD
EDSMDDFIASDSDETSMSLSSDDYTKKKKSKGKKVTKECSSSGSGSDNDVEVIKVWNSRS
RGGGEGNVEDLTNNPASTKSDEGKATSSSNPGSPAPDWYKDFDVNLMCSLNSRMSEILGE
KCKLFANRILVFSQSLISLDLIEDFLELANREKSDRDQPPIYKGEGKWFRNIDYYRLDGS
TTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIF
RVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYT
FEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTEE
ERKAAWAEYEAEKKGMTMRFNMPTGTTTMPTNFSSQTYIPYNLGALSAMSNQQLEDLINQ
GREKVVEATNSVAAARIQPLEDIISAIWKENLTLTESQVQALALNRQASQELDVKRREAI
YNDVLGKQQMLIGCVQRILMNRRLQHQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMNPSS
YPAIDVRGMYQSVSGGMQPPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagcccgtgagtgaaagcaagttgaatactttggtacagaaactccatgac
ttcttggctcactcatcagaagaatctgaggacgcaaactctcctccagcattatctaaa
aacaaaagtataggtaaaagtagagaacctaaaggaagtccagcttcaatggagaacaac
agggacgagggaagtagttcttctgaaagaaccaaatccttaggatcatcccgttccaaa
aggaaacctacagttgtaacaaaatatgttgggtcagatgatgaacaaatagcagatgaa
actgtaaatgaagatatttcaaatgagaactcagagaatgatgtagatatgcaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaagctcccaaaaag
cgtggagaagaaggactccatggaattgtgagctgcacagcttgtgggcagcaggtcaac
cattttcaaaaggattcaatctatagacaccctacactcaaagtgcttatttgtaagact
tgctacaaatattacatgagtgatgacatcagtcgtgattcagatgggatggatgagcag
tgtaggtggtgtgctgaaggtggaaatttgatttgctgtgacttttgccataacgccttc
tgtaaaaagtgcattttgcgcaacctgggccgaaaggagctctcgactatcctggatgaa
aacaaccagtggcactgctatatttgccatccagagcctttgttggacttggtcactgca
tgtgacagtgtctttgaaaatttagaacagttacttcaacaaaacaaaaaaaagatgaaa
gttgaaaatgaaaaaaataaaacatatgaccacacagtcaagttttctccaaagaaaaat
aatgcaaattgtaatggggaagaaaaaaaattagataattcatattcaggttcactaaca
tattcttataaagcactaatggtgccaaaagacttgcttaagaaaacaaaaaaactgatt
gaaactacaacaaatctgaattctagctttgtaagctttttgaaaaatgctgcagaaaat
gtagaaataagcccaactgtgcaactgtgccagctgaaagcttttaaatctgtgctgaat
gacatgaaaaaagctcatctgtcactagaagaaggcctgaacttagagattcaagcattg
aatgttaaaatcaaagataaaaataccaaagagaaaaaaactgaggttagatcagaaaaa
aatgaggtgaaaaaagatgaaggaaaggaacatgcagcattaaaagaggatgatgctgcc
cagacacagaagaaagtcgtgtcagagcggcctgacaatgagcccatggatcaaagtgtt
ccctcagtggagcagacagataacaaggcagcccctggggaagagaaaaagtctggcaga
aatgaagaaccacagtatgagcccaacagtacagaggctttggacatggatatcgtgtcc
atcccctcttccgttcccgaagatatttttgagactctggaatctgctatggagattcag
atgccctcagatgagcaggacagtggaaacacagcagcagatcacgaggctccaaattca
aatacaaaagccaacgctcctgtgaaagataccaaaggtggtaccaagctaaaatcctcg
gctaaaggaacaaaagaactgattgtaaaattgactcctgtttccctttcagagtccaca
gttaaatctgatgatcaagacaacagcctagaaaaggacagtaaagatgctgatgcatct
aaagatgctgatgcatctaaagacattgatgaatctaaagctgttgatgcatctcaacct
ggggcagcaaactctgagagtggaaaacaaaaccacagcgctggcagcgaggcctccacg
gagaacgacgccgtgcccgcggaggactcggatctccggaggtctccccgtgtcaaaacc
acccccctgaggcgccccacggacatcagccccctgacatccaactcagaagaggacagc
aacgacaccagcaatgagaaacccaagagaaaagcatccaagcaacccaggaggaaaagc
gataaaagaaacgcttccgacagcgctgctgatggtcccggccctaacaaactttccaaa
tgcaaaaagccatatgagttagatcacagctcagactctgatgaggtgccagctgtcctt
aaagaagcagggatgatgagtcgcagctcctcagacagtgagagcaacagcgaagcgcca
gcaaagaatcagaaaacttcagatttacagaagagtcaaccagtaaaggatgaaaatggg
aaaagaaaaaggaagagttccagttctggttcagatttagatgctaaaagaggcaaatca
gctaaaaatgctgctgctgctaaaaagaaacgacaaaactactctgattcttcaaattat
gattctgagttggaaaaagagatacaaatgttgagtaaaattgaggctgcaaagaaatcg
aaaaaattctcaaggaaagatgatagttatgattcctctgaagaagagcaggggaaaaaa
gtaagcagtaagaggaagttaaatctgaagaagaagagaggtaaatcttctgaagaagat
gatgatggtgagaagtcttctgcagagaaggaaacaaatcactcttctaaagataaaaag
acgggtaagaggtcagctgctaaggacaagctaagcagagactcaaaagagaaatctgca
aagggaaaacgtgatgagtcatctgatgctgagaagtcttcactggaaaaagaggagggt
cctgaagttaagaaaaagaaggatttgaaaaagaaaaaggcacaggatgattcttcttct
gagagtactgagaaatcggcaaagaaagagcacaagttggagtcttcaaaagacagactg
aagaacaaaaaaggatcagaaagcaaagcaaagaaatctgaaaaattaaaaaagaagggt
ttcaagaaagatcaagatgattcctcttctgatcttgataagtcatctgcagagagaggc
agtagcaattcttctgaaaacgacaaaattaaaaaggaacctgtgtttacagaaaagaga
aaattgagagagagagtagctaaaagagtacacattgatttatcttctgatactgagaaa
tctccccagaaagaggagagctctgatgatgatgccgtgcggcgtaaaaaacgaactgac
acgaaagaaaagaggaaaataagccacaaaaagaagatttccaagaaagaacaggatgac
tcatcctcttctgatgaggagtcttatgaagacactaagaaaaaggttaaaagaggatca
gtaaaagaaaataaaaagagcaacttaaagaagaaagtggccaaaaagaaggcggttgtc
acttcctcttccccgtctgacaaggaggaaaacgacgatcagaattccacgggcgacgga
agcagcgacgagcagaagatcaggcccgtgactgaaagcttgatgctgtctgctgatgga
ggattctgtcagtcatcaggagatgagggagatgctctatcaaggactatcccaatggag
gaggaggaagatgatgatgatgacgaccctgagaatagaattgccaagaaaatgctttta
gaagaaatcaaagccaatctttcctctgatgaggatacgtcttcagatgagcagccagag
gaaggaaagaagaaacccacaaagcaaactgagagcacagcagatgatggagagaaggaa
aaggaagacaagaaggcagaaaaggaagaagataattctgaggattcagactcagaggag
gaagaaacatccaagaagcccagatacagacacaggctgctgaggcagaagctcactgtg
agtgatggggagtctggagaagaaaagaaggtggtgaaaccaaaagacaaaaaagaaggg
gggaagcgcagaaatagaaggaaagtgagcagtgatgactccaatgactccgagttccac
gagtctgccgtgagtgaggaggtcactgagtctgaggatgaccaaaggccaaggacaaga
tctgccaaaaaagcagaggcagaggaaaaccagcgcagctacaaacagaaaaagaaacgg
aggaggataaaggttcaagaggattcatccagtgaaaatgagaataagagtaactctgag
aacgaggacaatgatgactccaaatctcctggaaaaggcaggaagaagatcaggaagatt
attaaagatgataagcttagaacagaaacacaaaatgcccttaaagaagaagaagaaaga
agaaaacgtatcgcagagagagaacgggagagagagaaattgagagaggtgatagagatt
gaagatgcctcacctctgaaatgtcccatcacaaccaagctggttttagatgaagatgaa
gaaaccaaagaaccattagtgcaggtccacaggagtatagttaccagactgaaaccacac
caagtagatggtgttcagttcatgtgggactgctgctgtgaatctgtaaaaaaaaccaag
acatctcctggctctggctgcattcttgctcactgcatgggcctggggaaaacattgcag
gtagtaagttttctccacacagtcttgctgtgtgacaaactggattttcggacaggtctg
gtcgtgtgtccactcaacactgccttgaactggctgaacgagtttgaaaaatggcaagaa
ggtttagaagatgaggagaaactagaggtttatgagctggcaactgtgaaaaggccccag
gagaggagctacatgctgcagcagtggcaggatgagggaggtgtgatgatcattggctac
gagatgtatcgaaacctggcacagggcaggaatgtgaagagtagaaaacttaaagaaata
tttaataaagctttagtcgacccaggtcctgatttcgtggtgtgtgatgaaggacacata
ctgaaaaatgaagcatctgctgtctccaaggcaatgaattctattaaatctaggagaaga
ataattctgacaggaacaccactgcagaataatcttatagaatatcactgcatggttaac
ttcatcaaggagaacctgctgggctccattaaggagttccggaaccggttcatcaatccc
atccagaacgggcagtgcgcagactccacccccgtggatgtcagggtgatgaagaaacgt
gctcacatcctctatgagatgttggctggctgtgttcagaggaaggattacacagcctta
accaagttcctgccccccaagtacgagtacgtgctggaggtgaggatgacccccatccag
tgcaagctctaccagtattacctggatcatctgacaggtgtaggtggtggcaatgaaggt
ggaagaggcaaagctggagctaaactattccaggatttccagatgttgagcagaatctgg
actcacccttggtgtttgcagctggactatattagcaaagaaaataagggctattttgat
gaagacagcatggatgacttcatagcctcagattcagatgaaacttccatgagcttaagt
tctgatgattatacaaagaaaaaaaaatccaaggggaaaaaggtgacaaaggagtgtagc
tcgagtggaagtggcagtgataatgatgttgaagtcattaaagtctggaattcaagatct
cgtggaggtggggaaggaaatgtagaagatcttacaaacaacccagcatcaacaaagtca
gatgaaggcaaagctacatcctcttccaatcctggtagcccagctccagactggtacaaa
gattttgatgtaaacttgatgtgcagcctgaattctcggatgtcggagattctgggagaa
aagtgtaagctctttgcaaatcggatcctagtgttcagccagtccctgatatctctggat
ttgatagaagatttcctggagctggctaacagggagaaatctgacagagatcagcctccc
atctataaaggtgaaggaaaatggttcagaaatattgattattatcgtttggatggctcc
accacagctcagtccagaaagaaatgggctgaggagttcaatgatgaaactaatgtgaga
ggccgcttgtttatcatatccaccaaagcagggtccctgggaataaacctggtggctgcc
aacagagtcatcatctttgatgcctcctggaacccctcctatgacatccagagcatcttc
agggtgtatcgcttcgggcagaacaagcctgtctttgtctacaggtttttggctcaggga
accatggaggacaagatctacgaccggcaggtgaccaagcagtcgctgtccttcagggtg
gtggaccagcagcaggtggagagacacttcaccatgaacgagctcaccgagctctacacc
tttgagccagacctgctggatgaccccaactcggagaagaagaagaagagggacaccccc
atgctaccaaaagacaccatcctggcagagctgctgcagatcaacaaggagtacatcgtg
gggtaccacgagcatgattcactcctggaccacaaggaggaggaggaactcactgaagaa
gagaggaaggcagcctgggcagaatatgaagcagaaaagaagggcatgaccatgcgtttc
aacatgcccacagggaccaccacaatgcccacaaatttcagctctcagacttatattcct
tacaacctgggtgctctgtctgcaatgagtaaccaacagctggaggacctcattaatcaa
ggaagagagaaggtagtggaagcaaccaacagtgtggctgcagcaaggatccagcccctt
gaagacatcatttcagccatatggaaagaaaacttgaccctgacggagagccaggtgcag
gccctggccctgaacaggcaggcgagccaggagctggacgtgaagcgccgggaagccatt
tacaacgacgtgctcgggaaacagcagatgttgatcggctgtgtccagaggatcctgatg
aaccggcgcctccagcaccagtacaaccagcagcagcagcagcagatgtcctaccagcaa
gcagccatgagccacctcatgatgccaaagcctccaaatctaatcatgaatccttccagc
tacccagccatagatgtgagaggaatgtatcagtcagtgtctggtgggatgcagccccca
cccctacaacgagcaccacccccaatgagaggcaaaaatccagggccttcccaagggaaa
tcaatgtga
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integrated database retrieval system
