Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447900
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Entry
135447900 CDS
T09958
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135447900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135447900
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135447900
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
135447900
NCBI-ProteinID:
XP_064569164
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Position
4A:complement(3937836..3945136)
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AA seq
583 aa
AA seq
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MSQFSFGAAAPGGAFGLGAPRAAAAATTATTATSGFSFSAPAPAPASTGFSFGSTAPAAG
GSQPAGLFSFSRPGTAAQPSSFSFGSASAAPAATTAAAAFSMGANTPKVTFGASTATPAP
AITGGFSFGVPAATSTPSSQAAAQSGFAFGSAASSSSSTAPSGTPGGFTFSSGSTSQAGT
AGFSIGTAAAPATAAGLSFGTAPAAAASTSTATLAAATPTAAPFSLGGQPSGLTFGAQPS
SAASSTSTATLTTSTSQAPTLSFGAKLGVTSTAASTASTTSTTSVLGSTGPSLFASVATS
SAPASSSTTGLSLGATSTGSTGTATLGTLGFGLKVPGTTAATTSTATGTTSASGFPLNLK
PLTTTGAIGAVTSTAATTTATTASAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQVN
AWDRMLIENGEKITSLHREVEKVKVDQKRLDQELDFILSQQKELEDLLTPLEESVKEQSG
TIYLQHADEERERTYKLAENIDAQLKRMAQDLKDIIDHLNTSGGPADTSDPLQQICKILN
AHMDSLQWIDQNSAVLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttcagcttcggggcggccgcgcccggcggcgccttcggcctgggcgcgccc
cgagccgccgctgccgccaccaccgccaccacggccaccagcggcttctccttctccgcg
ccggcgcccgcccccgcctccaccggcttcagcttcggcagcacggcgccggcggcgggc
ggcagccagcccgccgggctcttttccttcagcaggccgggcacggccgcgcagccctcc
agcttcagcttcggctcggccagcgcggcccccgccgccacgacagccgccgccgccttc
tcaatgggggcaaacaccccaaaagtgacctttggagccagcactgccactccagctcct
gcaatcacagggggcttttcctttggtgtccctgctgcaaccagcaccccctcgagccag
gcagcagcccaatctggctttgcctttggctctgctgccagcagcagcagcagcacggct
ccctctgggaccccaggaggcttcaccttctccagtggcagcacgagccaggcgggcacg
gccgggttcagcatcggcaccgcggctgcgccggccacggcggccgggctgagctttggc
acggcccctgcggctgctgccagcaccagcacggccaccctggcagctgccacccccaca
gcagcgcccttcagcctcggggggcagccctcaggtctgacctttggggcgcagccttca
tcagcagcctccagtacaagcacagcaacactgaccacaagcaccagccaggcacccacc
ctgagctttggagccaagctgggagtgacatccacagctgccagcacggcctccaccacc
agcaccacctcagtgctgggctccacggggccctccttgtttgcatctgtggcaacttct
tcagccccagcctcctccagcaccacgggcctctcactgggtgccacctccactggttcc
actgggacagccactctggggacacttggctttggattaaaggttcctggaaccacagct
gccaccacaagcactgccactgggacaacttctgcttctggcttccctttgaacctgaag
ccactgaccaccacaggtgccattggagctgtgacctccacagctgccacaaccacagcc
accacagccagtgcccccccagtgatgacttatgcccagctggagagtttgatcaacaag
tggagcctggagctggaggaccaagagaagcacttcctgcaccaggccacacaagtcaat
gcctgggaccgcatgctgatcgagaacggggagaagattacttcactacacagagaagta
gagaaggtgaaggttgaccagaagagactggatcaggaactggacttcattctgtcccag
cagaaggagctggaggacttgctgacccctctggaggagtctgtgaaggagcagagcggg
accatctacctacagcacgcagatgaggagcgggagaggacctacaaactggctgaaaac
atcgatgctcagctgaagcgcatggcacaagatctgaaggacatcattgatcacttgaac
acatcaggaggcccagcagacacaagtgaccctcttcagcagatctgtaaaattctgaat
gcacacatggattccctgcagtggattgaccagaattcagctgtgctgcagaggaaggtg
gaagaggtgaccaaggtttgtgagagtcgccgcaaggagcaggagcgcagctttaggatc
acctttgattga
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