Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447901
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Entry
135447901 CDS
T09958
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135447901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135447901
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135447901
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
GAS
Motif
Other DBs
NCBI-GeneID:
135447901
NCBI-ProteinID:
XP_064569166
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Position
4A:3921973..3928523
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AA seq
580 aa
AA seq
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MSQFSFGAAAPGGAFGLGAPRAAAAATTATSGFSFSAPAPAPASTGFSFGSTAPAAGGSQ
PAGLFSFSRPGTAAQPSSFSFGSASAAPAATTAAAAFSMGANTPKVTFGASTATPAPAIT
GGFSFGVPAATSTPSSQAAAQSGFAFGSAASSSSSTAPSGTPGGFTFSSGSTSQAGTAGF
SIGTAAAPATAAGLSFGTAPAAAASTSTATLAAATPTAAPFSLGGQPSGLTFGAQPSSAA
SSTSTATLTTSTSQAPTLSFGAKLGVTSTAASTASTTSTTSVLGSTGPSLFASVTTSSAP
ASSSTTGLSLGATSTGSTGTASLGTLGFGLKVPGTTAATTSTATGTTSASGFPLNLKPLT
TTGAIGAVTSTAATTTATTASAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQVNAWD
RMLIENGEKITSLHREVEKVKVDQKRLDQELDFILSQQKELEDLLTPLEESVKEQSGTIY
LQHADEERERTYKLAENIDAQLKRMAQDLKDITEHLNTSRGPADTSDPLQQICKILNAHM
DSLQWIDQNSAVLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttcagcttcggggcggccgcgcccggcggcgccttcggcctgggcgcgccc
cgagccgccgccgccgccaccacggccaccagcggcttctccttctccgcgccggcgccc
gcccccgcctccaccggcttcagcttcggcagcacggcgccggcggcaggcggcagccag
cccgccgggctcttttccttcagcaggccgggcacggccgcgcagccctccagcttcagc
ttcggctcggccagcgcggcccccgccgccacgacagccgccgccgccttctcaatgggg
gcaaacaccccaaaagtgacctttggagccagcactgccactccagctcctgcaatcacg
gggggcttttcctttggtgtccctgctgcaaccagcaccccctcgagccaggcagcagcc
caatctggctttgcctttggctctgctgccagcagcagcagcagcacggctccctctggg
accccaggaggcttcaccttctccagtggcagcacgagccaggcgggcacggccgggttc
agcatcggcaccgcggctgcgccggccacggcggcggggctgagctttggcacggcccct
gcggctgctgccagcaccagcacggccaccctggcagctgccacccccacagcagcgccc
ttcagcctcggggggcagccctcaggtctgacctttggggctcagccttcatcagcagcc
tccagtacaagcacagcaacactgaccacaagcaccagccaggcacccaccctgagcttt
ggagccaagctgggagtgacatccacagctgccagcacggcctccaccaccagcaccacc
tcagtgctgggctccacggggccctccttgtttgcatctgtgacaacttcttcagcccca
gcctcctccagcaccacgggcctctcattgggtgccacctccactggttccactgggaca
gcctctctggggacacttggctttggattgaaggttcctggaaccacagctgccaccaca
agcactgccactgggacaacttctgcttctggcttccctttgaacctgaagccattaacc
accacaggtgccattggagctgtgacctccacagctgccacaaccacagccaccacagcc
agtgcccccccagtgatgacttatgcccagctggagagtttgatcaacaagtggagcctg
gagctggaggaccaagagaagcacttcctgcaccaggccacacaagtcaatgcctgggac
cgcatgctgatcgagaacggggagaagattacttcattacacagagaagtagagaaggtg
aaggttgaccagaagagactggatcaggaactggacttcattctgtcccagcagaaggag
ctggaggacttgctgacccctctggaggagtctgtgaaggagcagagcgggaccatctac
ctgcagcacgcggatgaggagcgggagagaacctacaaactggctgaaaacatcgatgct
cagctgaagcgcatggcacaagatctgaaggacatcactgagcacctgaacacatccagg
ggcccagcagacacgagtgaccctcttcagcagatctgtaaaattctgaatgcacacatg
gattccctgcagtggattgaccagaattcagctgtgctgcagaggaaggtggaagaggtg
accaaggtttgtgagagtcgccgcaaggagcaggagcgcagctttaggatcacctttgat
tga
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