Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447936
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Entry
135447936 CDS
T09958
Symbol
MED12
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12 isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135447936 (MED12)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
135447936 (MED12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
135447936
NCBI-ProteinID:
XP_064569252
LinkDB
All DBs
Position
4A:complement(4528049..4562926)
Genome browser
AA seq
2160 aa
AA seq
DB search
MAAFGVLSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSAK
NVNFNPAKISSNFSSIIAEKLRCNTLPDTGRRKPQVNQKDNFWLVTARSQSAINNWFTDL
AGTKPLTHLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWLIKMTCAYYAAITETKVKKRHV
IDPFIEWTQIITKYLSEQLQKIAEFYRQLPGQGCGSPSGPMPQEVEQALKQWDYNEKLAM
FMFQDGMLDRHEFLTWVLECFEKIRSGEDEFLKMLLPLLLRYSGEFVQSAYLSRRLAYFC
TRRLAMQLDGAGGHPPHILSAQTGNALPSTPTPQPAAGNPPPSPFSDLLLCPQHRPVVYG
LSCILQSIILCCPSALVWHYSLTDSRIKTGSPLDHLPIAPSNLPMPGGNSAFTQQVRAKL
REIEQQIKERGQAVEVRWSFDKCQETTAGFTIGRVLHTLEVLDSHSFERSDFSNSLDSLY
NRIFGLGPTKDSHEISPDDDAVVALLCEWAVSYKRSGRHRAMVVAKLLEKRQAEIEAERC
GDSEVVDEKGSISSGSLSAASAPVFQDVLMQFLDTQAPMLTDPGKENEKVEFFNLVLLFC
ELIRHDVFSHNIYMCTLISRGDLAMDSHGPRPPSPFDDPAEEHDRKETEGSSGIKLEDTG
LSEPMDIDHNPSMLFDDMEKTDFSMFSPPMHCESKASPSPEKPDPEKEGKTLLKDKSVEG
MLASLYDQPRHIQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDARHTIKKITKDILK
VLNRKSTAETGGEEGQKRKKSKPEAFPTAEDIFAKFQHLSHFDQHQVTSQVSRNVLEQIT
SFALGMSYHLPLVQHVQFIFDLMEYSLNISGLIDFAIQLLNELSVVEAELLLKSSDLVGS
YTTSLCLCIVAVLRHYHSCLILNQDQMAQVFEGLCGVVKHGMNRSDGSSAERCILAYLYD
LYTSCSHLKSKFGELFSDFCSKVKNTIYCNVEPSDSNMLWEPEFMIDTIENPSAHNFTYT
NLGKSLNENPANRYSFVCNALMHVCVGHHDPDRVNDIAILCAELTGYCKSLSAEWLGVLK
ALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLIRCAAIPSLLN
AACSEQDSEPGARLTCRILLHLFKTPQLNPCQQDGNKPTVGIRSSCDRHLLAASQNRIVD
GAVFAVLKAVFVLGDAELKGSGFSHPGGVDDLMDDELGTRKAGGRVVTVETASLDIYAKY
VLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSTQAQRLMQLICYPHRLLDNEEGENPQR
QRIKRILQNLDQWTMRQSSLELQLMIKQTASNEMNSLLENIAKATIEVFQQSAETSSASC
TGNGVNNISSSTSATPASNKSKPILSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELE
KGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQIVT
NWREDQYQDDCKAKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTVDM
QSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSDSL
EKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVSTKQKISPWDLFE
GLKHSAPLSWGWFGTVRVDRKVSRFEEQQRLLLYHTHLKPKPRSYYLEPLPLPPEEEEPP
TPVALEPEKKSAEPAKADKTSSNPAASTEERKKKQSKTKKRNQSASKTEDFVLGPSRGVS
YGVGMPTDLLHHQSGSTMSRLAYGQSPVGLYAQNQPLPAGGPRLDTSYRPVRVPLGKLVQ
SRPPYSGVLPPGMGSMMGIDPSYKPAVYRQQPPVSQGQILRQQLQAKLQGQGIMGQQPVR
QMAPTPSYGALQPSQGYTPYVSHIGLQQHPSQSGTMVPPTYSGQPYQNSHPSSNPALVDP
VRQMQQRPSGYVHQQAPGYGHTLGNTQRFPHQSIQQTPMMSGMNHLGPQGVPSGIRPSQI
LPDQQQQQYLRQQQQQQMLRQQQQQQQQQQQQQQQQQQQPQAAQPQPQQQPQVSTVPQPQ
AQGQPPGLGMQALPPQQPIFQRQGLQQTQQQQQTAALVRQLQQQLSNTQTQQNNNPFGRY
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttcggcgtcctcagctacgagcaccgcccgctcaagcgcccgcgcctcggc
ccgcctgacgtgtacccgcaggaccccaagcagaaggaggatgagctgactgcgctgaat
gtcaagcaaggcttcaataaccaaccggcggtctctggggacgagcacggcagtgccaaa
aatgtcaatttcaacccggcgaagatcagctccaattttagcagtattattgcagaaaag
ctgcggtgcaacaccctgcctgacacgggcagacggaaaccccaggtcaatcagaaggat
aatttttggctcgtgacagcacgttcccagagtgccataaacaactggttcacagatctg
gctggaactaagcccctcactcaccttgctaagaaggtgcccatctttagcaagaaggaa
gaggtttttggttatttggccaaatacactgttccagtaatgagagcagcgtggctcatc
aaaatgacctgtgcctattacgctgccatcacggaaacgaaggtgaaaaagcgtcatgtc
attgatcccttcattgaatggacacagatcatcaccaagtacctgtcagagcagctgcag
aaaattgcagagttctacagacagctcccagggcaaggctgtggttcaccatcaggacca
atgccccaagaggtggaacaggctttgaagcagtgggactacaatgagaaactggctatg
ttcatgttccaggatggcatgttggaccggcacgagttcctgacgtgggtcctggagtgc
tttgagaagatacggtcaggagaggatgaatttctaaaaatgctccttcctttgctgctg
cggtactctggagagtttgtgcagtctgcgtacctgtccagacgtctggcctacttctgc
acccgcaggcttgccatgcagctggatggtgctggtgggcacccaccacacatcctgtct
gcccagacagggaatgctcttccttcaactcccacccctcagccagctgcagggaatcct
cctcccagccctttcagcgacttactgctgtgcccccagcaccggccggtggtgtatggg
ctcagctgcatcctgcagagtataattctgtgttgccccagtgcccttgtgtggcattat
tccttgactgatagcaggataaagactggctctccattggaccacctgcctatagcccca
tccaacttgcccatgccaggggggaattcagccttcacacagcaggttcgggcgaagctg
cgcgagattgagcagcagataaaggagcgtggccaggctgtggaggttcgctggtcattt
gacaagtgccaggaaaccacagcaggtttcacaattggccgtgtcttgcataccttagaa
gttctggacagccacagctttgaaagatctgacttcagcaactctttggattccttgtat
aacaggatatttgggctgggcccaaccaaagacagtcatgagatctccccagatgatgat
gcagtggtggccttgctgtgtgagtgggctgtcagctacaaacgctcggggcgccacagg
gccatggtcgtggccaagctcctggagaagcgtcaagcagagatcgaggctgagagatgt
ggggactctgaagtcgtggatgagaagggctccatctcctcgggctctctgtcagcagcc
agtgctcctgtctttcaggatgtccttatgcagttccttgacactcaagctcctatgcta
actgatcctgggaaggaaaacgagaaggtggagttctttaatctggtgctgctgttctgt
gagctgatccgacatgatgtcttctcccacaacatctacatgtgcacgctcatctcccgg
ggtgatctcgccatggactctcatgggcctcgccctccctcaccctttgatgaccctgct
gaggaacatgacaggaaagagacagaggggagcagtggcatcaagctggaggacacaggt
ctttcagagcccatggacattgaccacaaccccagcatgctctttgatgacatggaaaag
acagacttttcgatgttttctccaccaatgcattgtgaatctaaagccagcccttcccct
gaaaagccagatcctgaaaaggaaggaaagactctgctgaaggataagtctgtggaagga
atgctagcatccctgtatgaccagcctcggcacatccagtatgcaacacacttccctatt
cctcaggaggagtcatgcagtcatgagtgtaaccaaaggctggtggttctttttggggtt
ggaaaacaacgggacgacgctcgccataccatcaagaaaataaccaaagacattctgaaa
gtcttaaacagaaagagcactgcagagacaggtggggaggaaggccagaagaggaaaaag
agcaagccagaagcattcccaacagctgaagatatctttgcaaagttccagcacctttct
cactttgatcagcaccaagtcacatctcaggtatctcgtaacgtcttggaacagatcacc
agctttgctttgggaatgtcctaccacctgcctctggtgcagcatgtgcagttcatattt
gacttgatggagtattcactcaatatcagtggtctgatcgactttgccatccagttgctg
aatgaactgagcgtggtggaggcagaactgctgttgaaatcctccgaccttgttggcagc
tataccaccagcttgtgcctgtgcatcgtggctgtgctgcggcactaccactcctgcctt
atcctgaaccaggaccagatggctcaggtcttcgaaggtctctgtggggtggtgaaacac
ggcatgaaccgctcggacggctcctcagcagagcgctgtatcctggcctatctctacgac
ctctatacctcctgcagtcacctcaaaagtaaatttggggagctctttagtgacttctgc
tccaaggtgaagaacacaatctattgcaatgttgagccatctgactccaacatgctatgg
gaaccagagttcatgattgacactattgagaatccatctgcacataactttacatacact
aacctgggcaagagcctcaatgagaacccagccaatcgctacagttttgtctgtaatgca
ctgatgcacgtgtgtgtgggacaccacgatcctgacagggtgaacgacattgctatcctg
tgtgctgagctaactggctactgcaagtctctaagtgccgagtggctgggtgtgctcaaa
gctttgtgctgttcctccaataatgggacctgtggcttcaatgatctcctctgcaatgtt
gatgtcagtgacttgtctttccatgattccttggccacctttgttgccattctcattgcc
cggcagtgcctgctgctggaggacctgattcgctgtgctgctatcccctcactcctcaat
gctgcctgcagtgaacaggactcagaaccaggagcacgtctgacctgccggattttactc
catctgtttaagactccacagctgaacccatgccagcaagatggcaacaaacccactgtg
ggaatccgctcttcctgtgaccgtcacttgctggcagcttcccagaatcgtattgtggat
ggagcagtctttgcagtgctgaaggctgtctttgttctgggagatgcagaactgaaaggc
tctggcttttcccacccgggaggggttgatgatctcatggatgatgagctgggcaccagg
aaggctggtggtcgggtagtcactgtagaaacagccagcttggatatttatgccaagtat
gtactgaggagtatatgtcaacaggagtgggtaggagaacggtgtctgaagtccctctgt
gaagacagcaatgacttgcaggatcctgtcctgagcagcacccaggcccagaggctgatg
cagctgatttgttacccacaccggctcctggacaatgaggagggagaaaatcctcagcgg
cagaggattaaacgcatcttacagaatttggaccagtggaccatgaggcaatcctcgctg
gagctgcagcttatgattaaacagacagcaagcaatgagatgaactccttgttagaaaac
atagctaaggccaccattgaggtattccagcagtcagcagagaccagctctgctagctgt
actggtaatggagtcaacaatatcagtagctcaacaagtgctacacctgccagcaacaaa
tccaagcccatcctcagctccctggagagatcaggagtgtggctggtagcccctctgatt
gccaagcttccaacatcagtgcagggccacgtgctgaaagctgctggagaagagctggag
aaaggacaacatttagggtcatcatcccgcaaagagcgggaccgccagaagcagaagagt
atgtccctcctgagccagcagccttttctgtcactggtgctgacatgcttgaaaggtcag
gatgagcagcgggaaggcctcctcacctctctgtacagtcaggtccagcagattgttaca
aattggcgagaagatcagtaccaagatgactgcaaagccaagcagctgatgcatgaggcc
ttgaaactgcggctgaatttggtgggaggaatgtttgacacagtccaacgcagcacacag
cagacaactgaatgggccgtgcttctcctggacatcatcagcagtggcactgtggacatg
cagtcaaacaatgagctcttcaccaccgtgctggacatgctgagtgttctcatcaatggc
accctggctgctgatatgtccagcatctctcagggcagcatggaggagaacaagcgggca
tacatgaatctggtcaagaaactcaggaaggagctgggggaccgtcagtctgacagcctg
gagaaggtgagacagctactgccacttcccaagcagacccgagatgtcatcacctgtgaa
cctcagggatccctcattgacactaagggcaataaaatagctggctttgattccatcttc
aagaaggagggtttgcaagtctctacaaagcagaagatttctccttgggatctttttgag
ggtttgaagcactcggcccctctctcctggggatggtttgggacagtgcgggtggatcgc
aaggtgtccaggtttgaggagcagcagaggctcctcctgtatcacacacacctgaaaccc
aaaccccgcagttactacctggagcctttgccactgccccccgaagaggaagagcctcct
acacctgtggctttagagccagagaagaaaagtgcagaaccagccaaggctgataaaaca
agctccaatcctgctgcctccactgaggaacgcaagaaaaagcagagcaaaaccaagaaa
cgcaaccaatctgccagcaaaactgaggactttgtgttgggccctagccgaggggtttca
tatggagttggcatgcctactgatctcttgcatcaccagtcaggaagcaccatgtcaagg
ctggcatatgggcaatcaccagtgggtctctatgcccagaatcagcctcttccagcaggt
ggccctcgcctggacacatcctacagaccagtacgcgtgccactgggaaagctggttcag
agtcgccctccctacagtggtgtgctgcctccagggatgggcagcatgatgggcattgac
ccctcctacaagccagcagtgtacaggcagcagcctccagtgtcccaaggacagatcctg
aggcagcagctgcaagcaaagttgcagggccagggcattatgggccagcagcctgtgcgc
caaatggctccaaccccgtcttatggagcactgcagccctcccagggttacactccttat
gtctcccacataggccttcagcagcacccctcccagtcaggcacaatggtacctcctacc
tattctggtcagccctatcagaattcccaccccagctctaatcctgctctagtggatcct
gttagacagatgcagcagagaccaagtggctacgtgcaccagcaggcccctggctatgga
cacaccttgggcaacacacagaggtttcctcatcagtcaatacagcagacccccatgatg
agtgggatgaaccatttgggtccacagggagtcccctcaggaattcgacccagccagatc
cttcctgaccaacaacagcagcagtacctgaggcagcagcagcaacaacagatgctgagg
cagcagcagcaacagcagcagcaacaacaacagcagcagcagcagcagcagcagcagccc
caggcagcgcagccccagccccagcagcagccccaggtgtccacagtgcctcagccccag
gcgcagggccagcccccggggctggggatgcaggctctgcccccccagcagcccattttc
cagcgccagggccttcagcagacacagcagcagcagcaaacagctgctctggttcgacag
cttcagcagcagctttccaatacacagacacagcagaacaacaacccatttggacgctac
tga
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