Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447961
Help
Entry
135447961 CDS
T09958
Symbol
FMR1
Name
(RefSeq) fragile X messenger ribonucleoprotein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135447961 (FMR1)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135447961 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
135447961 (FMR1)
mRNA cycle factors
Stress granule specific factors
135447961 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
pAdhesive_11
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
135447961
NCBI-ProteinID:
XP_064569312
LinkDB
All DBs
Position
4A:6512552..6544240
Genome browser
AA seq
565 aa
AA seq
DB search
MEELVVEVRGSNGAFYKAFVKDVHEDSITVSFENNWQPERQIPFHDVRFPPPAGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLAVPEDLRQMCAKESAHKDFKKAVGAFSVTYDSENHQLIILSINDVTTKR
ANMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNIPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGATSRPPSNRPDKDKGYMTDDGPGLGRGSRPYRNRGHSRRGP
GYASGTNSEASNASETESDHRDELSDWSAAPAEEERDNYLRRGDGRRRGGGARGQGGRGR
GGFKGNDEQSRTDNRQRNSREAKGRTADGSLEIRTDCNNERSVHTQTLQNTSSEGSRLRT
GKERNPKKEKTDSADAQQPLVNGVP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaggtgcggggctccaacggggccttctacaaggcatttgta
aaggatgtgcatgaagattcaataacagtttcatttgaaaacaactggcaaccagagaga
caaatcccattccatgatgtgaggttcccaccacctgcaggctataataaagacataaat
gaaagtgatgaagtagaggtttattccagggcaaatgaaaaagaaccctgctgttggtgg
ttggctaaagtgagaatgataaagggtgagttctacgtaatagaatatgcagcctgtgat
gctacatacaacgaaattgtcacaattgagcgtttgagatctgtgaaccccaataaaccc
gcaacaaaagatacttttcataaaatcaaactggcagttcctgaagatttaaggcaaatg
tgtgccaaagaatctgcacataaggacttcaaaaaggcagttggagctttttctgtaaca
tatgattctgaaaaccaccagcttattattttgtcaatcaacgacgtgaccacgaagcga
gccaacatgctcattgatatgcactttcggagcctgcgcaccaagctatccctgatactg
agaaatgaagaagccagcaaacagctggagagttctaggcaacttgcatcccggttccat
gaacagtttgtagtacgtgaagacctaatgggtttggccattggcactcacggtgctaat
attcagcaagccagaaaagtccctggagtgactgccattgaccttgatgaagatacttgt
acattccatatttatggagaggatcaagatgcggtgaaaaaggcaagaagttaccttgaa
tttgctgaagatgtcatacaagtcccaaggaatttagtaggaaaagtaataggaaaaaat
ggaaaactgattcaagagatagtggacaaatccggcgttgtaagagtgagaattgaggct
gaaaatgacaaaaatattccacaagaagagggcatggtaccatttgtgtttgtaggaacc
aaggatagcatcactaatgcaactgttcttctggattatcatcttaattatttaaaggaa
gtggaccagctgcgtttggagcgattgcagattgatgagcaactgcgccagatcggagcc
acttcgcggcccccctcgaaccgcccggacaaggacaaagggtacatgaccgacgacggg
cccggcctcggccgcggcagccgcccctaccggaaccgcggccacagccggcgtgggcca
ggctatgcttcaggaactaattctgaagcatcaaatgcttctgaaacagagtctgatcac
agagacgagctgagcgattggtcggcggccccggcggaggaggagcgggacaattacctg
cgccggggggacgggcggaggcgcggcggcggcgcccgaggccagggcgggcggggccgc
ggaggattcaaaggcaatgacgaacagtcgcgaacagacaaccgtcagcgcaactcacga
gaggcgaaagggaggacagcggacgggtcccttgagatcagaactgactgcaataatgaa
aggagtgtccacactcaaaccttacagaatacctcgagcgaaggcagccggctgcgcacg
ggcaaggagcggaaccccaagaaggagaagacggacagcgcggacgctcagcagccgctg
gtcaacggagtcccctaa
DBGET
integrated database retrieval system
