Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447962
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Entry
135447962 CDS
T09958
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135447962 (AFF2)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
135447962 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
135447962
NCBI-ProteinID:
XP_064569315
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Position
4A:6640741..6997968
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AA seq
1284 aa
AA seq
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MDLFDFFRDWDLEQQCHYEQDRSALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPIDKNEQNFFPEPRNRMIP
SHQISSNSSTSMPPPSSLSSNSTLLHGHQSSRKSRTDWSRSGHNSSGAQPSQSSGQQSRT
KHSSSHDQSQGRYEDLYNCQSEQHKSGGTEEANAMATSSHSRRHTHAKSAPGEHTYKENS
HSKSPTELEFVGHGPGSPLPSTSLLTANNGLSTQNFPPGLHCKNSMVQQKPTAYVRPMDG
QDQVPNDSPELKPPIEIESGYGNQSFGALLEGKVNTPSSKSKVPKLNIPPVSEVALPNDS
SCVEEILREMTHSWPPPLTAIHTPGKAEQSKFSIPSKDSQHLTSGYNVQKWSDPAGKVAT
KSVPQKSMLEDDLKLSSDEDDNEQAAEKTKLRNIPVNSLPVPVAHAAGLAHSSGGSGSSS
ESESSSESDSDSESSSSDSECNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIINNQ
NEPHSESSSQAQSNQQAEGPNKGKLNSSLPPTDPKDRAILSPIREKAKPRVAQKTPEAKS
SKQKSPAHNEPTSQRTTGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQPKV
RTKAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEESLQ
AKVLPACTGSGSGVKVKDSGSNILSVSSLTSNGSNTSIDQTSNDLEEQLFSPIPIVQNEL
LSPLREYEELKSLWVKIDLSLLSRIPGQETFETTSVKNEPREANMKHRRPSRESPTPAAE
KPSTKSKRKHKQTESLDTFVESKKQRLEEPPASCLLPPCISPIPNHRITSTKESSSSSVK
KVTKKREEKLFPPPLSPLLDDPVHRRHSSDNSSFSQEPTVTNTSQTSSSSSSASKHRKNE
NKSSSNPKGICEEESHSTPTANTLLDTSHLEPDIWSAMPTLSNGNSEPRRPKITFDDVLH
NADYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSET
VELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFK
GFTRCYTDVKGRMSKQNSSKASQAPSPWGGNGKSTETPSPMSLSPSPVSSAGSSSGSAGS
SSAGTITIPQRIHHMAASHVNITNNVLRSYEHWDMADKLTKENKEFFVELDSVMGPLTQH
SSMTNLVRYVRQGLHWLRIEAHLL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgactttttcagggactgggacttagagcagcagtgtcactatgagcaa
gatcggagtgcacttaagaggaaggaatgggagagaaggaaccaggaagtccagcaagat
gaagatctctttgcttcaggttttaacctctttggggaaccctacaagacaaataaaggc
gacgcccttgcaaatcgtgtccagaacacattgggaaattatgatgagatgaaggatctg
ttaaccaaccactccaaccagagccaccttgtaggaatcccaaagaattctgtcccacag
acgcccattgacaaaaatgaacagaactttttcccagaaccgaggaacaggatgatccca
tctcatcagatcagcagcaactcatcaacatcaatgcctccaccttcttcattgtcatct
aattctactttgctgcatggccaccagagcagcaggaagtcgaggacagactggtcacgc
agtggtcacaactccagtggggcccagccaagccaatccagtggtcagcagagtcggaca
aagcacagctcttcccatgaccagtcacagggcaggtatgaagatctctacaactgccag
agtgagcagcataaaagtgggggaactgaggaggcaaatgctatggcaacatcttcacat
tcaaggaggcacactcatgcaaagtcagcacctggagagcacacctacaaagaaaacagt
cattcgaagtcacccacagagcttgagtttgtaggccatggtcctggatctccacttcct
tccacttctttgctaactgcaaataatggtctttccactcagaatttcccaccaggactt
cactgtaagaacagcatggtccagcaaaagcctacagcttatgtcaggcctatggatggt
caggaccaggtacctaatgactcacctgaactgaaacccccgatagaaattgagagtgga
tatggaaatcagtcctttggagcactgctagaaggaaaagtgaacacgcctagttcgaag
agcaaagtaccaaagctcaacattcctcctgttagtgaagttgcccttcccaatgactcc
agctgtgtggaagaaatactgcgggagatgacccattcctggcctcctcctctcactgct
attcacactccgggcaaggctgagcagagcaagttttctatcccaagcaaggactcccaa
catctgacctcaggatacaatgtacaaaagtggagtgatccagcagggaaagttgcaact
aagtcagtgccacaaaagtcaatgcttgaggatgatctaaaactcagcagtgatgaagat
gataatgaacaggctgccgaaaagacaaaattgagaaacattcctgtaaacagcctgcca
gtgcccgtggcacacgctgctggcttggcccactccagtggcggctccggcagctccagc
gagtccgagagcagctccgagtccgactccgacagtgagagcagctccagtgacagcgag
tgcaacgaggagtcccgcagtgccacgccagagcccgaacccccctcaacaaacaaatgg
cagctggataaatggctaaataaagtgaacccccacaacaagaccatcatcaacaatcaa
aatgagcctcacagcgagagcagctcccaggcccagagcaaccagcaggctgaagggcca
aacaaagggaagctcaacagcagcctgcccccgaccgatcccaaagaccgggcaatcctc
agtcccatccgagagaaagccaaaccacgggttgcccagaaaaccccagaggcaaaaagc
tccaagcagaagtcacctgctcataatgagccaacttcacaaaggactactgggaaaaag
caacccaaaaaggtagaaaggacttccagtgtagaagagtataactggcccaaaccaaat
aataccagcaacactcccaaagaaaaagacacacaggaaccccccgagcagccaaaggtt
cgaactaaagcagcagttgggaagacagctccaaggaaagaaccacgaactagcacaggt
ctcacttcagagaagaaaaagtacagaggccccagcaaaattgtcccaaagtcccgggag
ttcattgaaactgattcatctacttctgattcaaacacagaccaggaagagagcttgcag
gccaaggtgctgccagcctgcactgggtctggcagtggtgtcaaagtgaaggactctggc
agtaacatcctcagcgtaagtagcttaaccagcaatggcagcaacacatccattgaccag
accagcaatgacctggaggagcagctcttttctcctatcccaatcgtacaaaatgaactt
ctgtccccactgagagaatatgaagaactcaaatctctgtgggtgaaaatagaccttagt
ttactctctaggatacctggacaggaaacttttgagaccacgtctgtgaaaaatgaacca
agagaggcaaatatgaaacacaggcgaccatctcgagagtcccccaccccagcagctgaa
aaaccctccacaaaatccaaaaggaaacacaagcagacagaaagcctggacacctttgtg
gaaagcaagaagcagcgcctggaggagcctccagcttcctgtctgctcccaccttgtatc
tctccaattccaaaccacagaataaccagcactaaagagagcagcagtagctcggtgaag
aaggtgacaaagaaaagagaagagaagctgttccctcctcccttgtccccgctcttggac
gaccctgtgcaccggcggcacagcagtgacaacagctccttcagccaggagcccacggtc
accaacacctcacagaccagcagctcttcctcctctgcttctaaacacagaaagaatgaa
aataaatcttcttctaaccccaaaggaatctgtgaggaagaatctcacagtacacccaca
gccaacactcttcttgacaccagccatctagaaccagacatctggtctgcaatgccaacg
ctttccaatgggaattctgagcccagaagacccaaaataacatttgatgatgtgctgcac
aatgcagattattacatgcaagaggctaagaagctgaagcataaagcagatgcactgctg
gagaagttcggcaaggcagtgaattatgctgatgctgccctctccttcatcgagtgcggg
aacgctatggagcgagatccattagaagctaaatctccatacaccatgtactcagagact
gtggaactcatcaggtatgcaatgagactcaagaatttcacaggctcttctgccacagaa
ggggacaagaaattagcagttttatgctaccgatgcttatcacttctctacttgagaatg
tttaaactaaagaaggaccatgctatgaagtactccagatctctgatggaatattttaag
ggttttacaaggtgctacacagacgtgaaaggcagaatgagtaagcagaactcttcaaaa
gcctcacaggccccctccccttggggcggcaatggaaagagcacagaaaccccctcgccc
atgtccctgagcccgtcccctgtcagctctgctgggagcagctcgggcagcgccggctcg
tcctcggccgggaccatcaccatcccccagcgcatccaccacatggctgccagccacgtc
aacatcaccaacaacgtcctgcgcagctacgagcactgggacatggctgacaagctgacc
aaggagaacaaagagttctttgtagagctggactcagtgatgggacccttaacacaacac
agcagtatgaccaatctggttcgttacgttcgccagggactccactggctccgcatcgag
gctcatttgttgtag
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