Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447988
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Entry
135447988 CDS
T09958
Symbol
ATG4A
Name
(RefSeq) cysteine protease ATG4A isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04136
Autophagy - other
zle04140
Autophagy - animal
zle04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
135447988 (ATG4A)
04140 Autophagy - animal
135447988 (ATG4A)
04136 Autophagy - other
135447988 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135447988 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135447988 (ATG4A)
03029 Mitochondrial biogenesis [BR:
zle03029
]
135447988 (ATG4A)
Peptidases and inhibitors [BR:
zle01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
135447988 (ATG4A)
Membrane trafficking [BR:
zle04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
135447988 (ATG4A)
Mitochondrial biogenesis [BR:
zle03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
135447988 (ATG4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
135447988
NCBI-ProteinID:
XP_064569397
LinkDB
All DBs
Position
4A:complement(8547568..8559333)
Genome browser
AA seq
397 aa
AA seq
DB search
MEAVLSRYENQITLLSDYLEEFPETDEPVWILGRQHHLNTDKSKLLLDISARLWFTYRRK
FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILRCFLD
RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
DIKKMCWCPAQSSSVAHSSAHLHRSALGPNKNTAGLCPGWKPLLLIIPLRLGINHINPVY
IDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQSFVDSEENGTVDDKSF
HCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQKHPPHW
PPFIPPSKPEVTTTGAELIESTDKLFELEEEFEILSV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgttttgtctaggtatgaaaaccagatcactcttttgtcagactacttagaa
gaatttccagaaactgatgagccagtgtggattttaggaaggcaacaccacctaaacaca
gacaaatctaagttattgttggatataagtgctcgtctctggttcacttatagaagaaag
ttttcacctattggaggcaccggtccctcgtctgacgcgggctggggatgcatgctgagg
tgtgggcagatgatgctggcccaggcactgatctgcagacatttaggaagagattggcaa
tgggaaaaacacaaaaagcaaccagaagaatatcatagaatcttacggtgctttctggat
agaaaagattgctgttattccatccaccaaatggcacagatgggtgttggagaggggaag
tccattggagagtggtttggaccaaacacagttgctcaagtgctgaagaagcttgcttta
tttgatgaatggaattcattagcagtttatgtatctatggacaatacagtggtcatcgag
gacatcaagaagatgtgctggtgccctgcccagagcagcagtgttgcccacagcagtgca
catttgcacaggagtgctcttggcccaaacaagaacacagcaggattgtgcccaggctgg
aagcccctcctgctcattatccctctgcgcctggggattaatcacatcaacccagtgtat
attgatgcatttaaagaatgctttaagatgccacagtctttgggagcattaggagggaaa
cccaataatgcctattattttataggatttttaggcaatgagctgatctacttggaccct
cacaccactcagagttttgtagattcagaagaaaatggcacagttgatgacaagagcttc
cactgccagcaagcccctcacagaatgaagatcatgaatttggacccttcagtagcttta
ggcttcttttgcaaagaagaatgtgattttgataactggtgtagtcttgtacaaaaggag
attctaaagcagcagagcctgcggatgtttgagctggtgcagaagcacccaccccactgg
cctcctttcatacctccaagcaagccagaagtgacaaccacaggagcagaacttattgaa
tctactgacaagctatttgaattggaagaagaatttgaaatcctgagtgtatga
DBGET
integrated database retrieval system
