Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448029
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Entry
135448029 CDS
T09958
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135448029 (BRF1)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
135448029 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
135448029
NCBI-ProteinID:
XP_064569486
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All DBs
Position
5:2331977..2504757
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AA seq
681 aa
AA seq
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MPGGRVCGACGCAEIEVDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
LDGAGKTPTLGGGFHANLGKESRAKTLQNGKRQIHHLGNQLQLNQHCLDTAFNFFKMAVS
KHLTRGRKRTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLVLARELCINAP
AIDPCLYIPRFAHMLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLTEFQDTPTSQLTIDEFMKIDLEEECDPPSFTAGQK
KLKIQQLEKALSKKLEDFEGEISSYQDEIESELENSRPKAKGVFANFTKDDSIEDNASSI
FGEEEAEDEELEAAANHLNKDFYDELNEKDRSKRIEDGECRNGSETLVRPPALESLLGPL
PTAASLGITESIKECISTKDQEPGENTGDGELDLSGIDDNEIDRYILNEAEAQIKAELWM
KENADYLKEQKEKEARIAKEKELGIYKEHKPKKSAKKREPIQASTAGEAIEKMLEQKKIS
SKINYNVLRDLNSKGSNTPKKEDDSTDDSTNTKKLSRRKSIASRNIANPVNSVGKRLRPL
ISTQFAKKAATEEVTFPNAQAEASDVEKPAAVLVESGPVAYNPDEEVEEEEVEEDEDHCM
SALQLMGGNDYGCDMDEDDGY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgggcgggtatgcggcgcctgcgggtgcgcggagatcgaggtggacgcggcg
cgcggggacgcggtgtgcacgggctgcggctccgtgctggaggacaacatcatcgtgtcc
gaggtgcagttcgtggagaacagcggcggcggctcctccgccgtggggcagttcgtgtcg
ctggacggtgcagggaaaacaccgactttaggaggaggattccacgccaacctgggaaag
gagtcacgagcaaaaactctgcagaatgggaagcgtcagattcaccacttgggaaaccag
ctccagctcaatcagcattgcctggatactgccttcaattttttcaagatggctgtgagc
aaacatctgactcggggcagaaagaggacccacgtcatcgctgcctgtctctacctggtg
tgcaggacagagggaactcctcacatgttgcttgacctcagcgaccttcttcaggtgaat
gtctatgtgctgggaaaaacgttccttgtgttggccagagaactctgcataaatgctcca
gccatagatccgtgtttgtacattccccgttttgcacacatgctggagttcggggataag
aaccacgaggtgtccatgacggctctgaggctgctgcagaggatgaagagggactggatg
cacacggggcgccggccctcggggctctgcggggccgctctgctagtggcagcaagaatg
catgatttccgacggactgttaaagaggtcatcagggtggtgaaggtttgtgagtccaca
ttgaggaaaaggttgacagagtttcaagatacaccaaccagtcagctgaccatagatgag
tttatgaagattgacttggaggaagaatgtgatcctccttcgtttacagctggtcaaaaa
aaattgaagatacagcagcttgaaaaggcattatcaaaaaagctggaggattttgaagga
gaaatatcgagctaccaagatgaaatagagagtgaattagaaaacagcagaccgaaagca
aaaggtgtatttgcaaatttcactaaagatgattctatagaagataatgcctctagcata
tttggagaggaagaggcagaagatgaagagctagaggcagctgctaatcacttaaacaag
gacttttatgatgaacttaatgagaaggatagaagtaaaagaattgaagatggggaatgc
agaaatggaagtgaaactcttgtgagaccccctgcactggaatccttgcttggcccactg
cccactgctgctagtcttggcataacagagtccatcaaagagtgcatatccacaaaggac
caagagcctggtgagaatacaggggatggagaattagatctgagtggaatcgacgacaat
gaaatagatcggtatatacttaatgaagctgaagctcagataaaagcagagctatggatg
aaagaaaatgcagattatttgaaggaacaaaaagaaaaggaagcaagaatagcaaaagag
aaagaacttgggatttacaaggaacacaagccaaagaaatctgcaaagaagcgggagcca
attcaagccagcacagcaggagaggcaattgaaaagatgttagaacagaagaaaatctcg
agtaaaattaattataatgtgctaagggacctgaacagcaaaggaagtaacacaccaaag
aaagaggatgacagcactgatgacagcaccaacaccaagaagctgtcaagaagaaaatct
attgccagtaggaatatagccaaccctgtaaacagtgtgggaaaaagattaagacccttg
atttcaacccagtttgctaagaaggctgccactgaagaggttacctttccaaatgcacag
gctgaagcctctgatgtagaaaaaccagcagctgtgcttgtggagagtggcccagtagct
tacaaccctgatgaagaggtggaagaggaagaggtagaggaagatgaagatcactgcatg
agcgccttgcagttaatgggaggaaatgattatggctgtgatatggatgaagatgatggc
tattag
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