Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448056
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Entry
135448056 CDS
T09958
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B
KO
K17906
autophagy-related protein 2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04136
Autophagy - other
zle04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135448056 (ATG2B)
04136 Autophagy - other
135448056 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135448056 (ATG2B)
03029 Mitochondrial biogenesis [BR:
zle03029
]
135448056 (ATG2B)
Membrane trafficking [BR:
zle04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
135448056 (ATG2B)
Mitochondrial biogenesis [BR:
zle03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
135448056 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
135448056
NCBI-ProteinID:
XP_064569551
LinkDB
All DBs
Position
5:9213345..9258628
Genome browser
AA seq
2078 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLTQVPLDKWCLNEIL
ESADAPLEVTDGFIQSISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLASGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFLDTVLRIEHVPE
NSKSGTALEIRVERTMYCDETADECSGINVHQPTAFAHKLLQLSGVSFFWDEFPASAKSS
PVCSATQLATEPKLSPSWNPKIIYEPHPQLTRNLPEITPSDPVQICKLIGRMELSLTLKQ
NEVLPGAKLDVDGQIDSVHLFLSPRQVHLLLDMVAAIAGPGNLSRIELSNKDRKNRPMQQ
EDEYRIQMELKRYLRKESLSAGASSEQSFYETESARTPSSREEEVFFSMAEMDMSHSLSS
LPPLGDPPTMDLDLSLTSTYTTTPAGSPLSTTVLQPTWGDFLDRNKQELQPPRGSSLTAN
MVHQTSIRRTSIPSRSVSVDESRPELLFRLAVGTFSVSVLHIDPLPPPESSLNLNPLTPM
ARDFFARIEKIEPVKFSTEDFLSFREVFAEACSHDHLRFIGTGIKVSYEQRQRTASRSFS
TDLSIGEMEFLECLFSTDSHSMQPHYTELLTFHSEERNDSHSMPCLQLHYKHLDNRGPQG
SQGRLSSVPQKAELQIKLSPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYASYNKHI
SLHKAFAEVFLDDSHTPANCRVSVQVTAPALKLSVRFPIPDLRSDQERGPWFKKSLQKEI
LHLEFTDLEFKTEFIGGSTPEQVKLELTFKELTGSFEEDNAETPVKFFQVSGGTDGDITS
SSDNFDWPRIVLKINPLAVHSILERIAAEEEEGDNNFQEEEEGGSHSLKDVCDIRRPEPS
PFSSRRVMFENEEMVMPGDIVEMTEFQDKTISNSHYVLELTLPNIHLTLPNKSFYEKLYN
RISNDLLLWEPTAPSPVETFENLSYGVGLSVASQLINTFSKDSFSQFKSAVHYDDESGSE
EETLQYYSTVDPNYRSRRRKKLDSQNKNSQSFLSVLLNVTHGLVSIFTDVKQDDGNTLEG
KYGEFWFEFNSGSLFSVTKYEGFEDRHYVCLHSSSLNLYHQGLVDGVVPSSEVRLPSTIR
PHWLEPTICFSEEDGLSRTTSDGVGVDSPSMLTVAVKIQSDKIESNTKEFLVAVGLRGAT
LQHRVLPSGLSWHEQILYFLNISDEPVLGYSPPATITTFHVHLWSCALDYRPLFLPVRSL
LTVETFSISSSVAVDKSSSTLRIILDEAALHLSDKCNTVMVNLHRDYVRVMDMGLLELTI
TTVKSDSEGERTKPRFELHCSSDVIHIRTCSDSCAALMNLIQYIASYGDLHPPAKTEVKR
GVSKPKMKVETFSQPSSHGPGLAESEQQILRDLMSDAMEEIETQQTASAIKQESNGVFDD
KSQTQEPSCSDLFLFPDESGNVSQEPSPTYASFTHHLISEAMGDVPAESDDFCILFAPKV
AVAEKEEEPVIKIMVDDAIIIKENHFSQPIKKTDTSKAPLHFPVPLVRYVVKEISLIWHL
YGGRDFGAAPPTSPAKSFISPHSSPSHTPTRHGRNTACGGRGRNPDFLMEIQLSKVKFQH
EVYPPGGAEGESCLLEQPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNM
LTVKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTEVELLVTPDPE
VKKSPGAEVTCSLPRHVSSLKEPSPVISFASHKQANENGSIDSMDVVNGEDDQFSQETTS
YSDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLCYRHG
LLGVDKLFSYAISEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR
IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGPTFIEAKKIKRFPRH
RLAPQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPTVV
KPFIVATEATSNVLGGMRNQIRPDVRQEESQKWRLGED
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggcctttctcggagtccatcaagaagagagcctgcaggtacctgctgcagagg
tacctgggccacttcttgcaggagaagctcagcctggagcagctcagcctggatctctac
cagggcaccggctccttgacgcaggtccctctggataagtggtgtcttaatgagatcctg
gagtctgctgatgcacctctggaagtcacagatggatttatccaatcaatttctttatct
gtcccgtgggggtcgttgctgcaggataactgtgcattggaagtaaaaggattagagatg
gtcttcaggccaagaccaaggcttgcatctggttctgagcctatgtattggtcaagtttt
atgaccagtagtatgcagcttgcaaaagagtgtcttagccaaaaattgacagatgaacaa
ggagaagggtcccagccttttgaaggacttgagaaatttgcagaaactattgaaacagtt
ctaagaagagtaaaagttacctttttggatactgtgttacgaatagaacatgtgccagaa
aactctaaaagtggaactgcacttgaaatcagagttgaaagaactatgtactgtgatgaa
actgcagatgagtgctctggaattaatgttcatcagcccacagcttttgctcacaaattg
ctgcagctctcaggtgtctctttcttctgggatgagtttcctgcatcagcaaagtcctcc
ccagtgtgttcagctactcagctggcaactgaaccaaagctttcacctagctggaatcca
aaaatcatttatgagccacatccacaactaacaagaaacttgccagaaattaccccttct
gaccctgtacagatctgtaagctgattggtagaatggagttaagcctaacattaaaacaa
aatgaagtacttcctggagccaagttggatgtagatggacaaatagattctgtacatctg
tttctgtcaccaaggcaggttcatcttctattggacatggtagcagctattgctggacca
ggcaatctgagcaggatagaattgtccaataaagatcggaagaaccggcccatgcagcag
gaggacgagtatcgcattcagatggagctgaaacgttatttgaggaaagagtctttgtct
gcaggagcatcatctgaacaaagcttctatgagacagagagtgccagaacgccttctagt
cgtgaggaagaagttttcttctcaatggctgaaatggacatgtcccacagtctttcctcc
cttccacctcttggagatcctccaaccatggatctagacttgtctttaaccagtacatac
acaactacaccagcaggatctccattgagcactacagtgctgcaaccaacttggggtgat
tttcttgatcgtaacaaacaagaattacagcctccaagaggttcctcactaacagccaat
atggttcaccagacttccataagaaggacatctattccatccagatctgtttctgtggat
gaatccagacctgagctactttttagactggcagttggaactttctcagtgtctgtactt
catattgaccctttacccccacctgaaagttcactgaaccttaacccattgacaccaatg
gctcgggatttctttgcccgaatagaaaagattgagccagttaagttttcaacagaagat
tttctgtccttccgagaagtatttgcagaagcttgttctcatgatcaccttaggtttata
ggtactggcatcaaagtgtcttatgagcaaagacaaaggactgcctcacgaagctttagt
actgacttatccattggtgagatggaattcctggaatgccttttttctactgactctcat
tccatgcagcctcactatacagagctgctgacatttcattctgaagaaagaaatgattct
cattctatgccatgccttcagctgcattataagcatttagataatagaggacctcagggt
agtcaagggagactcagctctgttccacagaaagcagagttacaaataaagttaagtcca
gtgttttgtgagctggatattagtattgtagacagattaaattccttacttcaaccccag
aagctaactacagtggagatgatggcatctcacatgtatgcttcttacaataagcacata
agtctgcataaagcatttgctgaagtttttctggatgattcacatactcctgcaaactgt
agagtttcagttcaagtcactgccccagcattaaaactctctgttcgcttcccaatacct
gatctacggtcagatcaggaaagaggaccatggttcaagaaatcacttcagaaggagatt
cttcatcttgaatttacagatttggaatttaaaactgaatttattggagggtcaactcca
gaacaagttaaattagagcttacctttaaagagctaactggttcatttgaagaagataat
gcagaaacaccagtaaaattttttcaggtgtcaggtggcacagatggagatataacatca
tcatcagacaattttgactggcctcggattgtattgaaaataaaccctctggctgtgcac
tctattctggaaaggatagcagctgaggaggaagaaggtgataataactttcaagaggaa
gaagaaggagggtctcattctttgaaggatgtctgtgatattagaagaccagagccttct
ccgttttcttctcgtagggttatgtttgaaaatgaagagatggtgatgcccggagatatc
gttgaaatgactgagtttcaggataaaacaattagcaattctcattatgtactggaactc
acgttaccaaacattcacttaacactaccaaacaaaagcttttatgaaaaactgtacaac
aggatcagcaatgatttattgttgtgggagcccacagctccatctcctgtagaaacattt
gaaaacctttcttatggtgttggactatctgtggccagccaactcatcaacactttcagt
aaagacagcttcagtcaatttaaatctgcagttcattatgatgatgaaagtggatctgag
gaagaaacactacagtattattccactgttgatccaaactatcgttcacgcagaaggaaa
aagcttgactcacagaataagaactcacagagttttctgtctgttctgctaaatgtgaca
catggattagtgtcaatattcacagatgtaaagcaggatgatggaaatacactggaagga
aaatatggtgaattttggtttgagttcaacagtggttcccttttcagtgtgactaaatat
gaaggctttgaggacagacactacgtttgtctccattctagcagcctgaatttatatcat
caaggtttggtagatggagttgtcccctcctctgaagtacgactgcccagcacaatacgt
ccccattggttagagcctactatttgtttttctgaagaggatggtcttagtaggactact
tcagatggtgtaggagtggatagtcccagtatgctgactgttgcagtcaaaatccagtca
gacaaaatagagagcaatacaaaggaatttctggtggctgttggactgcgaggagccacc
cttcagcaccgtgtgttgccttcaggtttaagctggcatgaacagattttatattttttg
aatatttctgatgagcctgttctgggatatagtcctccagctacaattactacttttcat
gtgcatctgtggagttgtgctcttgattacaggcccttgtttttgccagtcagatctctc
cttactgttgaaactttcagcatttccagcagtgttgcagtagataaatcctcttctact
ctcaggatcattttagatgaagctgctttgcatttgtctgacaaatgcaacactgtcatg
gtgaacctccatagagattatgttcgtgttatggatatggggctgctggaactaaccatt
acaacagtaaaatctgattctgagggagaaagaactaaacctcgttttgagctgcactgt
tccagtgatgtaatccatatccgtacctgctctgattcgtgtgctgcactaatgaatctc
atccaatatattgcaagttatggtgatttacatccacctgctaagacagaggttaaacgt
ggagttagcaagccaaaaatgaaggtagagacctttagccaaccatcttcccacggacca
ggccttgctgagtcagagcagcagattttacgggatttgatgagtgatgccatggaagaa
attgagactcaacagactgcttctgccatcaagcaagagtctaatggagtttttgatgac
aaatctcaaactcaggagccatcttgctcagatctcttcctgtttccagatgaaagtgga
aatgtctcacaagagccaagtcccacttatgcttcatttactcatcacctgataagtgag
gccatgggagatgttccagcagaaagtgatgatttctgcattctttttgcacctaaagtt
gctgttgctgaaaaagaggaagagccagttataaaaataatggttgatgatgcaattatc
ataaaggaaaatcatttcagtcaacctattaaaaaaacggatacaagcaaagctccactt
cattttcctgttcctctggtacgctatgttgtaaaggaaatatctcttatttggcatctt
tatggtggaagggattttggggctgcaccaccaacttctccagctaaaagtttcataagt
ccccatagttctccttctcatacaccaacaaggcatggacggaatacagcatgtggagga
agaggaagaaacccagacttcctaatggaaatacagttaagcaaggtgaaattccagcat
gaggtatatcctccaggtggtgcagaaggtgaatcctgtctgttggagcagccagtgtca
cgacaagtttttattgttcaagacctggagatcagagatcgcttagctacatcacaaatg
aataaattcctctatctctactgcagtaaggagatgcccagaaaagcacattcaaacatg
ttaacagttaaagctttacatgtccgtccagagtctggcagatccccacaggaatgttgt
ttacgtgtttcactaatgccacttcgcctcaatattgaccaggatgccttgtttttcctg
aaggactttttcactagcctttctacagaagtagaactcttagttactccagatcctgaa
gtcaaaaagtctcctggtgctgaagttacatgtagtttgcccaggcatgtcagcagcctt
aaggaaccaagtccagtcatttcttttgcatcacacaagcaagcaaatgaaaatggcagc
attgattccatggatgtggttaatggagaggatgatcagttctcacaagaaacaacatcg
tacagtgatcagccagtatttttcagagaatttcgctttacatcagaagttccaatacgg
cttgattaccatgggaagcatgtatcaatggatcagggaacattagctgggattcttatt
gggcttgctcagttgaactgctcagaattaaagttgaagaggctttgttatagacatggt
ttattaggtgtggataaattattctcctatgccatcagtgaatggcttaatgatataaag
aaaaatcagctaccaggaattttgggaggagtagggcctatgcattcgcttgtacagtta
gtgcaaggtctgaaagacctggtgtggctgcccatagagcagtaccgcaaggacggtcgg
attgtcagaggctttcaaagaggagcagcttcttttggtacttccactgccatggctgcg
ctggagctgacaaacagaatggttcagactatacaggcagctgcagaaactgcttatgac
atggtatcacctgggcctaccttcattgaagcaaaaaagatcaaacggttccctcgccat
cgcttggctcctcagcccgtcgacctgcgggagggggtagccaaagcctacagtgttgtg
aaagaggggattacggacacagcccaaaccatctatgagactgctgctcgtgagcatgag
aacagaggagtcactggagcagtgggaggagtcctccgccaaatcccacccaccgtggtg
aaacctttcattgttgcaacagaggccacctccaatgtcctgggtggaatgagaaaccag
atcaggccagatgtgcgtcaagaagaatctcagaagtggcgccttggggaggattga
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integrated database retrieval system
