Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448058
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Entry
135448058 CDS
T09958
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
135448058 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zle03051
]
135448058 (PSMC1)
Proteasome [BR:
zle03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
135448058 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_14
AAA_25
AAA_3
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_7
Parvo_NS1
NB-ARC
ABC_tran
PhoH
AAA_24
NACHT
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
135448058
NCBI-ProteinID:
XP_064569554
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All DBs
Position
5:complement(12013334..12021335)
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGSKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggtggacacgggcctggtgggagcaagaaggatgacaaggac
aagaagaagaaatatgaacctccagttccaaccagagtggggaaaaagaaaaagaagacc
aagggaccagatgctgccagcaaactccctctggtgactccccacacacagtgcagactc
aagttgttgaaattggagagaattaaagattacctcttaatggaggaagagtttatcaga
aatcaagaacagatgaaacctttggaagaaaaacaagaggaggaaaggtccaaggtggat
gacctgagaggaacaccgatgtccgtgggtaccttggaggagatcattgatgacaaccac
gccatcgtgtccacgtctgtgggatcagagcactatgtcagtattctgtcttttgtggac
aaggacctgctagagccaggctgctctgttttgctaaatcataaggttcatgctgtgata
ggagtcctgatggatgacacagaccctctagtgactgtgatgaaagtagagaaagctcct
caagaaacctacgctgacattggtggccttgacaaccaaattcaagaaatcaaggagtct
gtggagcttcctctcacccaccctgaatattatgaagagatgggaataaagccacccaaa
ggagtcattctgtatggcccacctggcacaggcaaaactttactggccaaagcggtggca
aaccaaacatcagcaacgttcctgagagtggtgggctcggagctgatccagaagtacctg
ggggacggccccaagctggtgcgggagctgttccgcgtggccgaggagcacgcgccctcc
atcgtcttcatcgacgagatcgatgccatcggcaccaagaggtatgactccaattcaggg
ggtgagagagagatccagcgcacgatgttggagctgctgaaccagctggatgggtttgac
tctcggggggatgttaaagttatcatggccaccaacagaatagaaacactggacccagct
ttaattagaccaggacggattgacaggaaaatagagttccctctgcctgatgaaaagacg
aagaaacgaatctttcagattcacacgagcaggatgaccttggcagatgatgtgactttg
gatgagttgattatggcaaaagatgatctcagtggtgcagatattaaggcaatttgtaca
gaagctggattgatggctttgagggagcggagaatgaaagtaacgaatgaagatttcaaa
aagtctaaagagaatgttctctataaaaagcaagagggaacccctgagggattgtatctt
taa
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