Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448066
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Entry
135448066 CDS
T09958
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
135448066 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135448066 (VTI1B)
Membrane trafficking [BR:
zle04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
135448066 (VTI1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
WXG100
Fusion_gly
FapA
Snapin_Pallidin
DUF3958
KxDL
RSS_P20
Motif
Other DBs
NCBI-GeneID:
135448066
NCBI-ProteinID:
XP_064569588
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Position
5:27769900..27780968
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AA seq
232 aa
AA seq
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MAGRGSASSEHLERLHEIFRGLHGDLRAIPERLRGSAAEEKKKLVREFDEKQREASETLR
EMEEELKYAPVPFRNQMMSKIRAYRRDLSMFQRDMRSTDLGLGRGNQGDTKYGIFATENE
QSTNLQSQRVLLLQGTDSLNRASESIERSQRIAAETDQIGTDIIEELGEQREQLERTKSR
LVNTSENLSKSRKILRSMSRRITTNKLLLSIIIILELAILGGVVYYKFFRKK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgaggatccgcgtcctcggagcacctggagcggctgcacgagatcttccgc
gggctgcacggagacctgcgggccatccccgagcggctgcggggcagcgcggccgaggag
aagaagaaactggttcgagaattcgatgagaagcagcgtgaagccagcgagacgctgcgg
gaaatggaggaagagctgaagtatgctcctgtgcctttccgcaaccaaatgatgagcaaa
atccgagcctacagaagagacctgtccatgttccagagggatatgagaagcacagatttg
gggttgggccgtggaaaccaaggcgatacaaaatatgggatctttgccacagaaaatgaa
cagagtactaacctgcagtcgcagagggtgctgctgctccagggcacagacagtctgaac
cgagccagcgagagcatcgagcgctcgcagcgcatcgctgccgagaccgaccagatcggc
acggatatcatcgaggagctcggcgagcagcgcgagcagctggagcgcaccaagagcagg
ttggtgaacaccagtgagaacttgagcaagagtcgcaagattctgcgctcgatgtcccgg
agaataaccacaaataagttgctgctgtcaattatcatcatcctggaactggccatccta
ggaggtgtggtctactacaagttctttcgcaagaaatga
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