Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448067
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Entry
135448067 CDS
T09958
Symbol
SRP54
Name
(RefSeq) signal recognition particle subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03060
Protein export
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
135448067 (SRP54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
zle02044
]
135448067 (SRP54)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
135448067 (SRP54)
Secretion system [BR:
zle02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
135448067 (SRP54)
Eukaryotic Sec-SRP protein
135448067 (SRP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
AAA_22
AAA_33
DUF2209
nSTAND3
NPHP3_N
ResIII
MeaB
AAA_17
MobB
AAA_30
nSTAND_NTPase5
AAA_19
ATP_bind_1
PduV-EutP
APS_kinase
6PF2K
AAA_31
AAA_18
Zeta_toxin
AAA_16
AAA
Motif
Other DBs
NCBI-GeneID:
135448067
NCBI-ProteinID:
XP_064569589
LinkDB
All DBs
Position
5:complement(20271890..20287761)
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AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK
LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK
NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQLAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggttctggcagatcttggaagaaaaataacttcagcattgcgctccctgagcaatgcc
acgatcatcaatgaagaggttctaaatgctatgttaaaagaagtatgtacagcattactg
gaagctgatgttaatatcaaacttgtgaagcaactcagagaaaatgtcaagtctgcaatt
gatcttgaagaaatggcatctggccttaacaaaagaaaaatgatccagcatgcagtcttt
aaagagcttgttaagcttgtagatcctggagtcaaggcatggacacctaccaaaggaaaa
cagaatattataatgtttgttggtttgcaaggaagtggtaaaacaacaacttgttcaaag
ttagcatacttctatcagaggaaaggctggaagacttgtctaatatgtgcagacacatac
agagcaggtgcttttgaccagttaaagcagaatgccacaaaagcaagaattcccttttat
gggagttatacagaaatggatcctgtaataattgcctcagaaggtgttgagaaatttaag
aatgaaaactttgaaatcatcattgttgatacaagtggacgtcacaaacaagaagactct
ttgtttgaagaaatgttacaagttgctaatgccatacaaccagataacatcgtttatgtg
atggatgcttccattggccaagcttgtgaagctcaagctaaagctttcaaagacaaagta
gatgtagcttctgttattgtcactaagctggatggacatgccaaaggaggtggagccctt
agtgcggttgctgccacaaagagtcctattatttttattggaactggcgagcacatagat
gactttgagcccttcaaaacacagcctttcatcagcaagctgcttggtatgggtgatatt
gaaggattgatagataaagtaaatgagttgaagttggacgataatgaagcactcatagaa
aagctaaaacatggtcaatttacattaagagatatgtatgaacaattccaaaacatcatg
aaaatgggaccattcagtcagatcttgggcatgatccctggttttggaactgacttcatg
agtaaaggcaatgaacaggaatcaatggcaaggctaaagaaactcatgactataatggac
agtatgaatgatcaagaacttgacagtacagatggtgccaaagttttcagtaagcagcca
ggaagaatccaaagagtagcaagaggctctggtgtttctaccagagatgttcaggagcta
ttgacccaatacacaaagtttgcacagatggtgaaaaagatgggaggcatcaaagggctt
ttcaaaggtggtgatatgtccaagaacgtaaacccatctcagctggccaaactgaatcag
cagatggcaaagatgatggatccaagagttcttcatcatatgggtggcatggctggtttg
cagtcaatgatgagacagtttcaacaaggtgctgctggaaatatgaaaggcatgatggga
ttcaataatatgtaa
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