Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448084
Help
Entry
135448084 CDS
T09958
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04510
Focal adhesion
zle04520
Adherens junction
zle04530
Tight junction
zle04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135448084 (ACTN1)
04520 Adherens junction
135448084 (ACTN1)
04530 Tight junction
135448084 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
135448084 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135448084 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135448084 (ACTN1)
04147 Exosome [BR:
zle04147
]
135448084 (ACTN1)
Membrane trafficking [BR:
zle04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135448084 (ACTN1)
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135448084 (ACTN1)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135448084 (ACTN1)
Exosomal proteins of colorectal cancer cells
135448084 (ACTN1)
Exosomal proteins of bladder cancer cells
135448084 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_7
EF-hand_5
XisI
Uds1
FAZ1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
135448084
NCBI-ProteinID:
XP_064569626
LinkDB
All DBs
Position
5:complement(28394571..28480735)
Genome browser
AA seq
912 aa
AA seq
DB search
MDHYEQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDG
LKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKM
TLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCAL
IHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYV
SSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAP
ENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVS
DINNAWAGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDY
ETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQ
WDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIE
EIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPHEING
KWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHG
TLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLT
TIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDI
GNDAQKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRET
ADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYM
SFSTALYGESDL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggatcactacgagcagaccaatgactatatgcagccggaggaagactgggaccgggac
ctgctcctcgacccagcttgggagaagcagcagaggaagacattcacagcatggtgtaat
tctcacctccgcaaggctgggacgcagattgagaacatagaggaagatttcagggatggt
cttaaactcatgttacttctggaagtcatttcaggagaacgtctggcgaagcctgaaaga
ggcaaaatgcgagtgcacaaaatatccaatgtgaacaaggccttggatttcattgccagc
aaaggagtcaagctagtatccattggagcagaagaaatcgtggatggcaatgttaaaatg
acccttggaatgatttggaccatcatccttcgttttgccattcaggatatctcagttgaa
gaaacatctgctaaagaaggacttttgttatggtgtcagaggaagacagccccctacaaa
aatgtaaacatccagaacttccatatcagttggaaggatggccttggtttctgtgcttta
attcatagacaccgtccagagctcatcgactacggcaagctacgaaaggatgatcctctc
actaatctaaacacagcttttgatgtggctgagaaatatctggatattccgaagatgctg
gatgcagaagacattgttggaactgcccgtcctgacgagaaggccatcatgacctatgtt
tctagcttctaccacgccttctcaggagcccagaaggcggagacagcagcaaatcggatc
tgcaaggtgctggcagtcaaccaagaaaatgaacagctcatggaagactacgaaaaattg
gccagtgatctgctggagtggattcgtcgcaccatcccctggctggagaaccgggccccg
gagaacaccatgcaggccatgcagcagaagctggaggacttccgcgactaccggcgcctg
cacaagccccccaaggtccaggagaagtgccagcttgagatcaatttcaacaccctgcag
accaagctgcgcctcagcaataggccagccttcatgccctccgaagggaaaatggtctcg
gatataaacaatgcctgggctggccttgagcaggctgagaagggctacgaggagtggtta
ttgaatgagatccggaggctagagaggctggatcacctggcagagaagttccggcagaag
gcatccattcatgagtcctggacagatggtaaggaagcaatgctgcagcagaaggattac
gaaactgcaaccctgtcggagatcaaggccctgctgaagaaacatgaggcctttgagagt
gacctggctgcacaccaggaccgcgtggaacagattgctgctattgcacaagagctcaat
gagctggactattacgactctcccagtgtcaatgccaggtgccagaagatctgtgatcag
tgggataatctgggtgccctaacccagaaacgtagagaagccttggagaggacagagaaa
ctactggaaacaattgaccagttgtacctggagtatgccaaacgagctgcccctttcaat
aactggatggaaggggccatggaagacctgcaggacactttcatcgttcacaccattgag
gagatccagggattgaccacagctcatgagcagttcaaagccacgttgccagatgcggac
aaggagcgacaagccatcctgggaatccacaatgaagtctcaaagattgtccagacatac
catgtcaacatggcaggaacgaatccttacactacaatcaccccacatgagatcaatggc
aaatgggaacatgtgcggcagctggttcccaggagggatcaagccctgatggaagaacac
gcccgccagcagcagaatgaacggcttcgtaagcagtttggtgcacaggccaacgtcatt
ggaccctggatccagaccaagatggaggagattggccgcatttcaatagagatgcacggg
accctggaggaccagctcaaccacttgcggcagtacgagaaaagcattgtgaactacaaa
ccaaagattgaccagctggaaggagaccaccagctgatccaggaggcgcttatctttgac
aacaagcacaccaactacaccatggagcatatccgtgtgggctgggagcagttactaaca
acaattgctagaaccatcaacgaagtggaaaaccagatcctgacccgtgatgccaaagga
atcagccaggaacagatgaatgagttccgggcttctttcaaccactttgacagggaccac
tccggcacacttggccctgaggagttcaaagcctgtctcatcagcttgggttacgatatt
ggaaacgatgcacagaagaagactggtatgatggattgtgaagatttccgagcctgcctt
atctccatgggttacaatatgggagaggcagagtttgcccgcatcatgagcatcgtcgac
ccgaaccgtatgggtgtcgtgaccttccaggccttcattgacttcatgtcccgcgagacg
gcagatacagatactgctgaccaggttatggcttccttcaagatcctggctggagacaag
aactacatcactgtggatgaactgcggcgggagctgcctcctgaccaggcggaatattgc
attgctaggatggcaccctacaatggccgtgatgctgtacctggtgccctggactacatg
tccttctccacagcgctctacggcgaaagtgacctttaa
DBGET
integrated database retrieval system
