Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448104
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Entry
135448104 CDS
T09958
Symbol
SRSF5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03040
Spliceosome
zle05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135448104 (SRSF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135448104 (SRSF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zle03041
]
135448104 (SRSF5)
Spliceosome [BR:
zle03041
]
Common components
Common spliceosomal components
SR proteins
135448104 (SRSF5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DUF2202
Motif
Other DBs
NCBI-GeneID:
135448104
NCBI-ProteinID:
XP_064569692
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All DBs
Position
5:28894598..28899103
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AA seq
265 aa
AA seq
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MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLSSRVSW
QDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSK
RHSRSRSRSRSRSRSSSGSRSRSRSRSRKSYSRSRSRSRSKSRSVSRSPLPSKSQKRASS
SRSKSPSSVDRQRSRSRSRSVDSGN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctgccgcgtcttcatcgggaggctgaacccggccgccagggagaaggatgtg
gagaggtttttcaaggggtacggccgcatccgcgacatcgacctgaagaggggtttcggc
ttcgtggagtttgaggatccgagggatgcagatgatgctgtttatgaattggatggaaaa
gaactttgcagtgaaagggtgaccattgagcatgccagagcacgctcgaggggcagaggc
agagggaggtactctgaccggttcagtagccgccgcccgcgcagtgacaggagaaacgcc
ccacctctaagaacagaaaatcgcctcatagtggaaaatttgtcttcccgtgtcagctgg
caggatctcaaagacttcatgaggcaagccggtgaagtaacctttgcagatgcacacaga
cctaagttaaatgaaggggtggttgaatttgcctcttacagtgatttaaagaatgctatc
gaaaagctttctggtaaagaaattaatggaaggaaaatcaaactaattgaaggcagtaaa
aggcacagtaggtcccggagcaggtcacggtcacgcagcaggagctcctctggctcgcgc
agccgctctcgttcccgcagccgcaagtcctacagccggtcacgcagcaggagccgcagc
aagtcgcggtcagtcagcagatctccactgcccagcaagagccagaaacgggcttcttcc
agcagatccaaatctccgtcatccgtagaccggcagaggtctagatcgagatccagatct
gttgatagtggcaactga
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