Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448155
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Entry
135448155 CDS
T09958
Symbol
MLH3
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135448155 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135448155 (MLH3)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
135448155 (MLH3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
zf-TAZ
Motif
Other DBs
NCBI-GeneID:
135448155
NCBI-ProteinID:
XP_064569887
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Position
5:18040964..18046532
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AA seq
1125 aa
AA seq
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MIRRLVEDVRARLRSGVTVNSLGQCVEELVLNSIDAKATCVAIRVDLEAFKIQVVDNGSG
IGKEDLKAVGKRYFTSKCSSVRDLENLTFYGFRGEALASIANMAGVVEISSKTSSSAKTF
MKLFHNGQALEVCEAELNRPSGGTTVTVCNLFHQLPVRRKCMDPVLEIERVRQKVEAVSL
MHPSVSLSLRNDISCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREINHKSGGFEISGFIS
TEGHYNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKSKSVPASRQANSSPGRHRCG
PELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVKIFLKREHLFIEPCS
EDIREFNEHNDFCLHNAPVLKPSIVDEKSIQENFKKACNEIVDSYEICSLQSKDVKRKSI
TGKKSSSLIESSKNAQETKNAPVQNTAESSDPCRNNKAEIPLPSKDDTVSDLIKSNTSEQ
KPKYTSSSHKVSDTRLKPSEHLCSSFSGGARSEIREIDGCGDLEGCAENNIKDVGSQQGQ
VMQESNKVLVLNKDVIQSLLEREDPTETAVGPETVSRRSLIRLPNARRNRGAAKVLDDAR
RGAVSSIPLKSRLTDLIKSVVQNESPHDCEQTETNLASNSRCRPAPVSAKGIFDHKVNVI
QSSNAKGISSNANREYTASLTREVCKTDGHENKALSHRVREETALPAATNKRPYETSNSA
ELPLATSSGIPHKRIVIKNTRRQIAVPRSQPSKKLSLSTQLGSLEKFKRYYGKVKSTLPT
PTSEQNECGLPVLNSETNSDFSKDGNGNHDNFGSCETPPAAEDEDSNNISQGFGSLEKTL
FCSGEMSQDKQALCQSPLTLSDYSLVSNKTTSCRRSPGSLSSKLSRMKTDHKEIEQLGEQ
FQTDSNRKDVHSFDCESSNNDFLYNVCQTYKSSVEKMRECKSSISKEAVCSQSDGVIAES
VKSPVSSSPLSNIEGEYTVSSVLASPAKNDCTDIICKDKSTLGESSEQNMKDTEVPHVTL
QRHLEFSDDNTSTGNPRNDSVWLQDFDALSGKTVYINKATGLSTYGTPPCEGFQTACIQD
ITTMALNVVSENVLLLTMMYRRIILIISLPSLKSHQPWSKXILPF
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacgtttggtggaagatgtgcgagccaggctgcgttctggagtcactgtcaac
tcacttgggcagtgtgttgaggagcttgtcctcaatagcattgatgccaaagcaacatgt
gtagctatcagggtggatttggaagcttttaagatccaggtggtggacaatggctctggg
attgggaaggaggacctaaaggctgttggcaagcgctacttcaccagcaagtgcagctca
gtgagagacttggagaacctgactttctatggcttcagaggagaggctttggcaagtata
gccaacatggctggtgtagtggaaatctcatctaagaccagcagttcagcaaaaacattt
atgaaactgtttcacaatgggcaagcactggaagtatgtgaagctgagttgaacagacca
agtggcggaactacagtcacggtgtgcaatctgttccatcagttaccagtgaggagaaag
tgtatggatcctgtgctggaaattgagagagtgagacagaaggtagaggctgtttcgcta
atgcatccttctgtttctctttccttaagaaacgatatttcttgttccatggtgcttcag
ctccctaagacaagagatgtgtactctcgcttttgtcaaatttatggactgggcagatcc
cagaagttgcgagaaataaatcacaagtctgggggatttgagataagtggttttatcagt
actgagggacattacaataagaatatgcagttcttgtatgtgaataggaggcttgtttta
aagacaagactacataaactaattgattttttattaagaaaggaaagtgtaatttgcaag
tcaaagagtgtccctgcaagccgacaggctaattcaagtcctggtcgccatcgctgtggg
ccagagttgtatgggatctttattctcaatgtaacctgtgcatacagtgactatgatgtg
tgcctggagcctgcaaagactctgattgagttccagaactgggatgttcttctaacttgc
atagaggaaggagtgaaaatatttttgaaacgagagcatttatttattgaaccatgtagt
gaggacatcagagaatttaatgaacacaatgacttttgtttacataatgctccagttctg
aagccttcaattgttgatgagaagagcatccaggaaaattttaagaaagcatgtaatgaa
attgtggattcttatgaaatatgtagcttgcaatcaaaagatgtcaagaggaaatccatt
actgggaaaaaaagttcaagtcttatagagtcaagtaaaaatgcacaggaaactaaaaat
gccccagttcagaacactgctgaatcatctgatccatgtagaaacaataaagcagagatt
ccgttgccaagcaaagatgacacagtttctgatttaattaaatcaaatacctcagaacag
aagccaaaatacaccagcagttcccacaaagtatctgatactcgtctgaaaccttcagaa
catctttgttcctctttcagtggaggagccagatcagaaataagggaaatagatggttgt
ggtgacctagagggttgtgcagagaataatataaaagatgtgggcagccagcaaggtcaa
gtaatgcaggaaagcaataaggttcttgtcttaaataaggatgttattcaatcactgctt
gagagagaagaccccactgaaacagcagtgggacctgaaactgtctctagaaggtcatta
ataagactgcctaatgcaagaagaaacaggggagcagctaaagtgctagatgatgccaga
agaggggctgttagttcaataccattaaagtcacgccttacagaccttataaaaagcgtt
gtgcaaaatgagtccccacatgactgtgaacagacagaaacaaatcttgcatcaaactca
cggtgtaggcctgcccctgtcagtgccaagggtatttttgaccataaagtaaatgtgatt
cagtcttcaaatgctaagggtatttccagtaatgctaatagagaatatacagcttctctt
accagagaagtatgcaagactgatggtcatgagaacaaagctttgtcacatcgggtgagg
gaggagacagctttgcctgctgctaccaataaacgaccttatgaaacatcgaacagtgcg
gaattgccactggcaacttcttcaggtattcctcacaagaggattgttatcaaaaacact
agaaggcagatagctgtgccaagatcgcagccctctaagaaactgagcttgtccacacag
ctgggatcattagagaagttcaagagatattatgggaaagttaagtctacactaccgaca
cccacgtcagagcaaaatgaatgtggtctcccagttcttaattcagaaactaactctgac
ttttcaaaggatgggaatggcaatcatgataactttggcagttgtgaaactccacctgca
gcagaagatgaagattctaataatattagccaaggttttggttccttggaaaagacttta
ttttgcagtggagaaatgtcgcaggacaaacaagccctttgtcagagtcctttgacattg
tctgattactctctggttagtaacaaaaccacaagttgtagaagatctccaggatcatta
tcatccaaactgtccagaatgaaaactgatcacaaagaaatagaacaacttggtgaacag
ttccaaacagactcaaatagaaaagatgtccattcttttgattgtgaatcctcaaataat
gattttttgtataatgtttgtcaaacatacaaatcctcagtggaaaaaatgagggagtgt
aagtccagcatttctaaggaggctgtgtgctcgcaatcagatggtgtgatagcagagtct
gtgaagagtcctgtcagctcatcaccactcagcaatatagaaggagagtacacagtctct
tcagttttagcctcacctgctaaaaatgattgtactgacatcatctgtaaagacaaaagt
acattaggtgaatcctcagaacaaaatatgaaagatactgaggttccccatgtgaccttg
caaaggcacttggagttctctgatgacaacacgagcacaggcaatccgaggaatgattct
gtctggctccaagatttcgatgctttatcgggtaagacagtgtacatcaataaagcaact
ggactcagcacctacggcactcctccttgtgaaggatttcaaactgcctgcattcaagac
ataacaacaatggctctgaacgttgtttcggaaaatgttttgttgctcacaatgatgtac
agaagaatcatattaataatatctctgccaagtctaaagtctcaccagccttggagcaag
taaatcctacctttctga
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