Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448232
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Entry
135448232 CDS
T09958
Symbol
TRIP11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135448232 (TRIP11)
Membrane trafficking [BR:
zle04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
135448232 (TRIP11)
Retrieval pathways
135448232 (TRIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
Motif
Other DBs
NCBI-GeneID:
135448232
NCBI-ProteinID:
XP_064570075
LinkDB
All DBs
Position
5:11238965..11266807
Genome browser
AA seq
1947 aa
AA seq
DB search
MASWLGGLGSGLGQSLGQVGDSLSSLTGQISSFTKDILLEGAEEVGDAATELHVSNSRLR
EIESINAAQKLENDRLKKVCSDLEEKHEAAELQIKQLSIEYRNQLQQKEVEISHLKARQN
ALQEQLQKVQTAQLGAGVLPAATASASYVPEVRHSSGFEGDDMDFGDIIWSQQEINRLSN
EVSRLESEVDHWKQIAVSSKVQGTNDAEQSEICKLQKVVKELKQNLSQEIDEHQHELSVL
QDAHRQKLVELSRRHREELREYEERIEELENRLQQDGVSTDAVDDSKITEQKRKAQSPDG
GQVEELRVVKDLEDEIRKLNHQLSSAKAENKNLLKEQEFAKLEKIQIAQDYEKLKSDFDA
LQRSVAEQDALLKEQKQPQSKTSLPQDVVSLQQALLEAENEIARLSSLNQGLEKELTSAQ
HKHENILSSNTEDQNSEINQLRQDLERKEHELDESIAERETLIAELEELDKQNQEATQHM
ITLKEQLSKQHTETDSIIKQLKLDIDCERKKVSELETEKMKAIKELDSQKEKLSHCSYAL
NDLHITKQQLQDNIKDLQEQLRKAHECNSQSKKEIEELQQRLKEREEELRVSLSKLTEKS
NEESNHTCQDLILKDREVEIAKLQNDVSENKRINEDLQKSLSNLRIENGKLMAAIEELKQ
ELSDAISEKKKVHLEKDTLVEALKMEKRQLESELNETEKRLLEQARNYEKTIEDLSKARS
MDTSALQLEHERLVKLHQEKDFKLAELKKTIEQMELDHQETKEMLTTSLGGQKQLTDLIK
EKEVFIEKYKNQALQAKQELEEYMKVSKKQDVLKQNLEEKDRSLAVMKEENNHLKEEIER
LKDQQSRSTPVVEPKTLDIIIELESEVTQLKVIKNNLEEEIKVHKKTIEDQNQATVKLQQ
SLQEQRKEIDESKLQCQQMNVTHERLFLEKDEEIKNLQKTIEQIKTQLHKERQIIQTDAS
DLFQETKVQTLNGENGNEKHDLSKAEIERLVKGIKEREMEIKLLNEKNVSLSQQIDQLSK
DEVGKLTRIIQEKDLEIQALNARVSSASYRQDVLSLQQQLQAYVLEREQVLAVLSEKTRE
NSQLKTEYRNIMDMVAAKEAALVRLQEENRRLSNRSENSSQDMSRETIQNLSRIIREKDI
EIDALSQKCQTLLTVLQTSSTGADNGAGGVNSNQFEELLQERDKLKQQVKKMEEWKQQVI
TTVQNMQHESAHLQEELHRLQAQISVESDSTSRLQVDYNGLIQSYEQNEKKLKSFSQELA
QVQHSIGQLYSTKDLLLSKLDLVTPSVATAATVSQLSGVQCSPPEALSEESKLLQNELEQ
LKKKLQEKDSTIRILQENNQRLSDSVATASEIERKSQEGTESEMRQIKEKHDVLQKSLRE
KDILIKSKSDQLLSVSENLSNKENENELLKQAVTNLKERNLILEMDIRKLKEENEKIVAR
CREKETEFRALQETNMQFSMMLKEKEFESHSMKEKALAFEKLLKDKEQGKTGELNQLLNE
VKSMQEKAVTFQQERDQVMVALKQKQMESSALQSEVQHLHEKEQRLNQELERLRNHLLEM
EDSYTREALAAEDREVKLRKKVLILEEKLASSSTAVENASHQASLQVESLQEQLNLVSKQ
RDETMLQLTISQDQVKQYALSLANLQMVLEQFQQEEKAMYSAELERHQKQSAEWKKKAEN
LEEKVVSLQESLEEANAALDAASRLTEQLDIKEEQIEELKKEGEVRREMLEDMQNKLMNL
MNSTEGKVDKLLMRNLFIGHFHTPKNKRLEVLRLMGSILGLKKEELDQLLSEEQRGVTRW
VTGWLGGGAGSKSVPSTPLRPTHQNIFNSSFSELFVKFLETESSPSLPPPKLSVHHMKPL
GAAGTGKTSSTPPNSQMQDSPVSGVGRRPDANPFLAPRSAAVPLITPASSSGHLLMKPIS
DALPTFTPLPVSPDASAGAVLKDLLKQ
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtggctgggcgggctgggctcggggctgggccagtccctggggcaggtgggc
gacagcctgtcctcgctcaccgggcagatctccagcttcaccaaggacatccttctggaa
ggcgcggaggaagtgggcgatgcagcaacagaactccatgtgtccaattctagactcaga
gaaatagaaagtattaatgcagcacaaaagcttgaaaatgatagactgaaaaaagtctgt
agtgacttagaagaaaagcatgaagcagcagagctgcaaataaagcagttgtctatcgag
taccgcaatcagcttcaacagaaggaggtggaaatcagccatctaaaagccagacagaat
gcactacaggaacagctgcagaaagtacagacagctcagctgggagctggtgttttgcca
gcagccactgcatcagcctcctatgttccagaggtcagacattcctcaggttttgaggga
gatgacatggattttggagatataatctggtcgcaacaagaaataaacagattgtccaat
gaagtttccaggctggaatctgaggttgaccactggaagcagattgcagtgtcttccaaa
gtgcaaggcacaaatgatgctgaacaaagtgaaatatgcaaactacaaaaagttgttaag
gagctgaaacagaatttaagtcaagaaatagatgaacatcagcatgagctgtcagtactg
caggatgcccacagacagaagttagtagagttaagtcgtcggcaccgagaagagctgcgc
gaatatgaggagcgaattgaggaacttgagaatcgcttacagcaagatggtgtgagcact
gatgccgtggatgactctaaaattactgaacagaaaagaaaagctcagagtccagatgga
ggacaggtggaagaattgcgggttgtaaaggacctagaggatgaaataagaaaattaaat
caccaattatcttctgccaaagcagaaaacaaaaatcttctgaaagagcaagaatttgca
aagctagaaaaaatccaaatagcacaagattatgaaaagcttaaatctgactttgatgca
cttcaaaggtctgtggcagagcaagatgctctcctgaaagaacagaagcagccccagtcc
aagacatcactaccacaagatgttgtcagcctacagcaagcattgttagaagcagaaaat
gaaatagcaagactttccagtttaaatcagggacttgagaaggaactgacaagtgcacaa
cataaacatgagaatattctttcttcgaatacagaggatcagaattcagaaataaatcag
ttaagacaagatttggaaaggaaagaacatgaattagatgaaagtattgctgaaagagaa
acattaatagcagagttggaagaactagacaagcagaatcaagaagctactcagcatatg
attacattgaaagagcagctgtcgaagcaacacacagaaactgatagtatcatcaaacag
ctgaaacttgacatagattgtgaaaggaagaaggtatcagagttagaaactgagaagatg
aaagctattaaagagttagatagtcagaaagaaaaactaagccactgttcatatgcactt
aatgatttgcatataactaagcagcagctacaagacaatattaaagatcttcaggaacaa
ttaagaaaagcccatgagtgtaattcacagagtaaaaaagaaattgaagagttgcagcag
agactaaaagaaagagaggaggaacttcgtgtatccttgagcaagttaacagaaaaaagt
aatgaggaatctaaccacacttgtcaagatctgattctgaaagacagagaagtagaaatt
gcaaaactacagaatgatgtttcagaaaacaaacgaataaatgaagatctacagaaatct
ctgtctaatctcagaatagaaaatggaaagctgatggcagccattgaagaactaaaacag
gagttaagtgatgccatttctgagaaaaagaaagttcatttggaaaaagacactcttgtg
gaggctttgaaaatggagaaaaggcagttggagagtgaattaaacgagacagagaagagg
cttttggaacaagcacgtaattatgagaaaactattgaggatctgtcaaaggcgcgaagt
atggacaccagtgccctgcagctcgagcatgagcgcctggtgaagcttcatcaagagaaa
gactttaagcttgctgagcttaaaaagaccattgagcagatggaacttgaccatcaagaa
acaaaggagatgttgactactagcttaggaggacaaaagcagttgacagatctcataaaa
gagaaagaagtattcattgaaaaatacaaaaatcaagccttacaggcgaagcaggaactt
gaggaatatatgaaagtttcaaaaaagcaggatgtcttaaaacagaacttggaggaaaaa
gacagaagtcttgcagtcatgaaagaagaaaataaccatttgaaagaagaaattgaacgg
cttaaggatcagcaaagtagatctacacctgtggttgagcctaaaactttagatattatt
attgagcttgaaagtgaggtaacacagttaaaagtgataaagaataatcttgaagaagaa
ataaaagttcacaaaaaaacaatagaagatcagaatcaagcaacagtgaagcttcagcag
tcactgcaggagcagcgaaaggaaatagatgagtccaaattgcagtgtcagcaaatgaat
gtcacacacgaaagactctttttagaaaaagatgaggaaatcaaaaatttgcagaaaaca
attgaacaaattaaaactcagttgcacaaagagagacagattattcagactgatgcttct
gatctttttcaggaaaccaaggttcagactcttaatggagaaaatggaaatgaaaagcat
gacttatctaaagctgaaattgaaagactggtcaaaggtatcaaggaaagggagatggag
attaagctgttaaatgaaaagaatgtttctctaagtcagcaaattgatcagctgtctaag
gatgaagttggtaaacttactcggatcattcaagagaaagatttagaaatacaagctctt
aatgctagagtttcctcagcttcctacagacaggatgttctttcccttcagcagcagctg
caagcttatgttctggaaagggaacaagtactagcagttctaagtgaaaagacaagggag
aacagtcagttaaaaacagagtatcgtaatatcatggacatggtcgctgctaaagaagca
gctctggtgaggttgcaggaggagaaccgaaggttatccaatagatctgaaaacagcagt
caagacatgtccagagaaactattcagaatctatcccgtatcatccgagaaaaagacatt
gaaatagatgccctaagtcaaaaatgccaaaccttattgactgtcttgcagacatccagt
acaggtgctgataatggggcagggggtgtgaacagtaaccagtttgaggaacttctgcaa
gaacgtgataaactgaaacagcaagtaaagaaaatggaggagtggaaacaacaggtaata
accacggtccagaacatgcagcatgagtcagcccacctccaggaagagttgcacaggctg
caagcacaaatttcagttgaaagcgatagtacttcaaggctgcaggtagattataatggc
ttgattcagagttatgaacagaatgagaaaaagctgaaaagttttagccaggaattagca
caagttcaacacagcataggacagctttatagcactaaggatcttctcctgagcaaactg
gatttggtaacgccatctgtggcaacagctgccaccgtttcacagctttcaggtgttcaa
tgcagtcctcctgaagcacttagtgaggaatctaaactccttcaaaatgagttggaacaa
ctgaaaaaaaagttacaagaaaaagattcaactatcaggattcttcaggaaaacaatcag
cgattatctgattctgttgctacagcatcagagattgaaagaaagagtcaagaaggaact
gaatcagagatgagacagatcaaagaaaaacatgatgtgttacagaagtcactaagagaa
aaagatatattaattaaatctaaaagtgatcagttactttccgtgagtgaaaatcttagt
aacaaagaaaatgaaaatgagcttttgaagcaagctgtaactaatctaaaagaaagaaat
ttaattttagaaatggatattcgaaaactgaaagaagaaaatgaaaaaatagttgcaagg
tgcagggaaaaagagacagaattccgtgcacttcaggagactaatatgcaattttcaatg
atgctgaaagagaaagagtttgagtctcactcaatgaaggaaaaagctcttgcttttgag
aagctgttgaaagacaaagaacagggcaagacaggagaattgaatcagctgttaaatgaa
gttaaatcaatgcaggaaaaggctgttacttttcagcaggagagagaccaagtgatggta
gcactcaaacagaagcaaatggagagcagtgctctgcagagtgaggtgcagcatttgcat
gagaaggagcagcgcctaaatcaggaactggagaggctgaggaatcaccttttggaaatg
gaagactcatacaccagagaggctttagctgcagaagacagagaggtcaagctaagaaaa
aaggttttgattttggaagaaaaacttgcatcctcatctactgcagtggagaatgccagc
catcaggctagtctgcaagttgaatctttgcaagagcagttaaacctagtgtccaagcag
agggatgaaaccatgctgcagctgaccatctcccaggaccaagtgaagcagtatgcactg
tctctggccaacctgcagatggtactagagcagttccaacaggaagaaaaagctatgtat
tcagcagagctggagagacaccaaaaacagagtgcagaatggaagaagaaagcagaaaac
ctagaagaaaaagttgtatcactgcaggagagtttagaagaggcaaatgctgctctggat
gcagcatccaggcttactgagcagcttgacatcaaagaggagcagattgaagaacttaag
aaagaaggtgaggtcagaagagaaatgttggaagatatgcaaaataaattaatgaacctt
atgaacagcacagaaggaaaagtggacaaactgttgatgagaaatctcttcattggtcat
tttcatactccaaaaaataaacgtcttgaagtgttaaggttgatgggaagtattttggga
ctgaaaaaggaggaacttgatcagttactatctgaagagcaaagaggagttacaagatgg
gtgactggctggcttggtggaggagctgggtcaaagagtgttcctagtacacctctgaga
ccaactcatcagaacatttttaatagttctttttcagaactgttcgtgaaattccttgaa
actgaatcttccccaagccttcccccacccaagctctctgttcatcacatgaaaccttta
ggagcagcaggaactggtaaaactagcagtactccacccaacagtcaaatgcaagattct
ccagtctcaggagtgggtagaagaccagatgcaaatccatttttagcacctcgatctgca
gcagtgcctctcataacaccagctagtagttctggacatctgcttatgaaacctatttct
gatgcattgcctacttttacaccactgccagtgtcccctgatgccagtgctggtgctgtt
ttaaaagacctcctaaaacaatag
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integrated database retrieval system
