Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448311
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Entry
135448311 CDS
T09958
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04136
Autophagy - other
zle04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135448311 (ATG13)
04136 Autophagy - other
135448311 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135448311 (ATG13)
03029 Mitochondrial biogenesis [BR:
zle03029
]
135448311 (ATG13)
Membrane trafficking [BR:
zle04131
]
Autophagy
Autophagosome formation proteins
ULK complex
135448311 (ATG13)
Atg1 complex
135448311 (ATG13)
Mitochondrial biogenesis [BR:
zle03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
135448311 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
135448311
NCBI-ProteinID:
XP_064570239
LinkDB
All DBs
Position
5:33671705..33697638
Genome browser
AA seq
549 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGAV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQLSSSR
LSYQPAALGVGSADMGYPVLFAGGLNAAHPHQLIGPGKEGGVPPVPSQPAHGTQADQERM
CTPLEGVHYSAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQVTMA
NLDIPFAMFAPKNVELEDNDPMVNPPESPETESPLHGSLHSEGSSGSSTGNTHDDFVMVD
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaaatttttt
gctttaaagacagtacaagtaattgtccaggcccgacttggagagaaaatctgtacccgc
tcgtcatcctccccaacaggttctgactggttcaatttggcaatcaaagatataccagag
gttactcatgaagcaaagaaagccctggcaggacagctgcccgctgttggacggtctatg
tgcgtggagatttctctcaaaacctcagagggggactccatggagctggaaatttggtgt
ctggaaatgaatgaaaagtgtgacaaagaaatcaaagtttcatacactgtatacaacagg
ctgtctctattgctgaagtctttgcttgctataaccagagtaactccagcctacagactc
tctaggaaacaaggccatgaatatgtaatattgtacaggatatattttggtgaagtccag
ctgagtggcttgggagaaggtttccagacagtccgtgttgggacagtgggtaccccagtg
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattataattgatcactttgtggaccgtccctat
cccagctcttcacccatgcatccctgcaattacagagctggtgaggacaatggtgcagta
tacccctcagtagaagattcccaagaagtgtgtaccacatctttttccacctctcctcca
tctcagtgtgtttttactgtcacaaaggcacattttcagacccctcctcctgtggtgacg
gacaccttgaaggtcccagtgatggggctggccttttcacatcaactttccagctcacgt
ctttcctatcagcctgctgccctgggagttggatcagctgacatggggtatcctgtactc
tttgctggtggtttgaatgctgcacaccctcaccagttgattggtccaggcaaagaaggg
ggagttcccccagttcctagccagccagcacatggcactcaagctgaccaagagaggatg
tgcaccccactggagggagtccattactcagcagctactccttctagcagtgaggacaca
gaaacagtatccaacagcagtgaaggaaagtgtggctccccacatgaccttttggagacc
atctttatccggaaggtgggagcttttgtcaacaaacccattaaccaggtgaccatggcc
aacttagacattccttttgccatgtttgctcccaagaatgttgagctggaagataacgac
cccatggtcaatcctcctgaatccccagagacagaatctcccctacacggcagcttacac
tcagagggctccagtggcagcagcacagggaacacccacgatgacttcgttatggtcgac
tttaaaccagcattttcaaaggatgacattcttccaatggacctggggacattttaccgt
gaatttcagaacccccctcaactcagcagcctctccattgacattggagcacagtccatg
gcagaggatttggactcgttaccagagaagctggcagtccatgagaaaaatgtcaaagaa
tttgatgcttttgtggaaaccttgcagtga
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