Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448487
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Entry
135448487 CDS
T09958
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135448487 (SCFD1)
Membrane trafficking [BR:
zle04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
135448487 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
135448487 (SCFD1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
135448487
NCBI-ProteinID:
XP_064570626
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All DBs
Position
5:complement(22180810..22230151)
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AA seq
632 aa
AA seq
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MAAGIREKQTVALKRMLNFNVPPVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDAIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDI
ANAAIGANAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETIM
DTIVDSLFCFFVTLGAIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQ
FSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESAGTESTPAGARPK
KKNKKSYDLTTSDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGIEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKSRKLDVYFEYEEKIMS
KSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISSAQAPSEIDLEQYKKALMDAGCNLAPL
SYIKQWKAFTKMASAPTSYGNATPKPLGLFSRVMNTGSQFVMEGVKNLVLKQQNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLIDY
IKGKQGKHVLYGCSELFNATQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggatccgggagaagcagacagtggctttgaaacgtatgctgaacttcaat
gttcctccagttaaaaacagcacaggagaaccagtatggaaggttctcatttatgacaga
tttggccaagatatcatctcacctttgctgtcagtgaaagagctgagggatatggggatc
actttgcatctgcttttgcattcagatcgggatgctattcctgatgttccagctgtttac
tttgtaatgccaacagaagaaaatattgacagaatgtgccaggatcttcgaaaccagctt
tatgagtcttactatttaaacttcatttctgccatttcaagaagtaaactggaagatatt
gcaaatgctgctataggtgctaatgcagtaactcaagtggctaaggtgtttgatcaatat
cttaattttattactttagaagatgatatgtttgtattgtgtaaccaaaacaaagaactt
gtttcataccgtgccattaaccgaccagatataacagacacagaaatggaaactataatg
gacactattgttgatagtctcttctgtttttttgttacacttggggcaataccaataatc
agatgctcaagaggaactgcagctgaaatggtggcagtgaaactggataagaagctcaga
gagaatctaagagatgccagaaacagtctttttacaggtgacacacttggagctggccaa
ttcagcttccaaaggcccttattagtccttgttgacagaaacatagatttagcaactcct
ctacatcatacttggacataccaagctttagtgcatgatgttctggatttccatttgaat
agagttaacttggaggaatcagcaggaacagaaagcactccagcaggtgcaagacctaag
aaaaaaaataagaagtcctatgatttaactacatctgataaattctggcaaaagcataag
ggcagtccttttccagaggtggccgagtctgttcagcaagaactggaatcctacagagcc
caagaagatgaagtcaaaagacttaaaagtatcatgggcattgaaggggaggatgaagga
gcaataagtatgctttcagataatacagctaagctaacttcagctgtcagctctcttcca
gaacttctggaaaagaagaggctcattgatcttcatacaaatgttgcaacagccgttttg
gagcacataaagagtcgaaagctggatgtgtattttgaatatgaggaaaaaataatgagc
aaatccactctggataaatctcttctggacatgatttctgacccagatgcaggaactcct
gaagacaaaatgcgattatttctcatctattacataagctcagctcaggcaccttcagag
attgacttggaacagtataaaaaggcattgatggatgcaggttgtaatcttgctcccttg
agctacataaaacaatggaaagctttcactaagatggcttcagctccaaccagctatgga
aacgctacacctaaacctttgggtctgttttcacgtgttatgaatacaggatcacagttt
gtaatggaaggagtgaagaacttggtactgaagcaacaaaatctgccagtcacacgtatt
ttggacaaccttatggagatgaagtcaaaccctgagacagatgactaccggtactttgac
cccaagatgctgcgaggcagtgacagttcagttccaagaaataaaaatccattccaggag
gccatagtatttgtagttggaggaggcaactatattgaatatcaaaatcttattgactac
ataaagggtaaacaaggcaaacatgtgctgtatggctgcagtgaactttttaatgccaca
cagtttataaaacagctgtcccaacttggccagaaataa
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