Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448497
Help
Entry
135448497 CDS
T09958
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03013
Nucleocytoplasmic transport
zle03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135448497 (PNN)
03015 mRNA surveillance pathway
135448497 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135448497 (PNN)
03041 Spliceosome [BR:
zle03041
]
135448497 (PNN)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135448497 (PNN)
Spliceosome [BR:
zle03041
]
Complex C
Other components
EJC/TREX
135448497 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
135448497
NCBI-ProteinID:
XP_064570645
LinkDB
All DBs
Position
5:complement(18661355..18671363)
Genome browser
AA seq
694 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLALAGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLE
VQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTK
PHLFYIPGRMCPATQKLMDESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEHQEV
QNEEKKEEQNKEQEEGKVAQQVEEMETGNQHNDVEMEEVGEEKGKIGSGSGHSDAEKEQE
EDEQKHDIEMKVEEPTEVRENDKQQDGQHEEVTVIKEEGENIQPVDNDQDVAEMNEADSV
EPVENENGKEIEAETECDAQPEKVCNVPSPKKERGIKTENNAELEETQEKTPEAQTESVA
EALSQPQSVPLAQSPQLSQSTQDTEPQTDKDENAVVSVKVVEAQAEQNQTPSAESKSKTR
SRSRGRAGNKPGHTRSSSSSSSSTSSSTTSASSSSTGSSSSRSSSTSSSTTSGSTSRDSS
SSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSS
RSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgtgcgctgcaggagcagctggagaaagccaaggaaagcctcaag
cacgtggacgaaaatatccgcaagctcacgggccgggaccccaatgatgtgaggcccccc
caaaacaggctgctagccctcgcaggccccggtggaggtagaggccgtgggagcttattg
ctaaggcgtggattctcggatagtggaggaggacccccagccaaacagagggatcttgaa
ggtgcatccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgatgatattaaaaagccagcgttgccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgctgatgggcactcttcaaaaatttaaacaggagtct
acagttgctattgctactgaaaggcaaaagagacgacaagaaattgagcagaaacttgaa
gtgcaggcagaggaagagagaaagcaagttgaaaatgagaggcgagaactgtttgaagaa
agacgtgctaaacagacagagctgcggttattggagcaaaaggttgagcttgctcagttg
caagaagaatggaatgaacataatgctaaaataattaaatacataagaacaaagacaaaa
cctcatttattctacatacctgggagaatgtgtcctgctacacagaagctgatggatgag
tcacagaaaaagatgaatgcgctctttgaaagcaggagaaatgaatttgcagagcagatt
aacaaaatggaggccagacccagaagacaatctgtgaaggaaaaagaacatcaggaggtg
cagaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcag
caggtggaagagatggagacaggtaatcagcacaatgatgtagaaatggaggaggtaggg
gaggaaaagggaaaaataggttcaggttcagggcatagcgatgcagaaaaagaacaggaa
gaggatgagcagaaacatgacatagagatgaaagtagaagagcctactgaggtgagggag
aatgacaagcaacaggatggtcagcatgaggaggtcacagttataaaagaggaaggtgaa
aacattcagcctgtggataatgatcaggatgtggctgaaatgaatgaggcagatagtgta
gaacccgtagaaaatgaaaatggcaaagaaatagaagcagaaacagagtgtgatgctcag
ccagaaaaagtgtgtaatgttccttctcccaagaaggagagaggtatcaaaacagaaaat
aatgctgaactggaagaaacacaggagaaaacacctgaagctcagacagaatcagtggct
gaggctctatctcagccgcagtctgtgcccctagcacaatcacctcaattgtctcagtcc
actcaggatacagagccccagacagacaaggatgaaaatgctgtggtgtctgtaaaggtg
gttgaagcccaggcagagcagaatcagacaccgagtgcagaaagtaagagtaagactagg
agtaggagcaggggtagggcagggaacaaacctggtcatacccgtagcagcagcagcagt
agcagcagcacttccagcagtactaccagtgcaagtagttccagtactggcagcagttcc
agtcggagcagttccaccagcagcagcactaccagtgggagtacgagcagggacagcagc
agcagcagctcgagcagtagtgagagcaggagtcggagccgaggcaggggccataacaga
gatagaaagcgcagaaggagcacagacaggaagcgaagggatgcttcaggagtagataga
agtcacaagtcctcaaaaggtggtagtagagatactaaaagctcaaaggataaaagttca
aggtctgatagaaagagatctatatcagaaagtagtcggtcaggcaagagaacgtcacgg
agtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
DBGET
integrated database retrieval system
