Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448503
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Entry
135448503 CDS
T09958
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135448503 (ZC3H13)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
135448503 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
135448503
NCBI-ProteinID:
XP_064570653
LinkDB
All DBs
Position
1:complement(62173686..62219038)
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AA seq
1650 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVEAEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPSPRKSSKSPKRRSSPKSSSSAGKKDKKAST
VSSPLLEQQRSSKSTQSKKKGPRTPSPPPPVQEETPLGKKHKEKHKAKERSEEKARDVKE
RGRDFERHKEKKEKQRDPSESSRRQKRSPSPADHSGSNSSPSREYSPPAARRKQTSRAPA
KAATHKHNFSPSRRSASPSGQHHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQR
TASPPARRSSSPYPPHSSSPPQRKRSPSRHRSPARDKGRHDRDRTSQSHDRRHERRDETR
GKREKERETRDDRDYDQEQSTSRDHRDDRESRDGRDRRDTRDTRDRREPRESRDTRDSRD
TRDYSRDTKDSRDQRDSRSTRDSHDYRDRESRDAHKKDDQYQDDLRSYGRSHGREESSRA
ETRNDSRSDSRNESRSDRIGRSRGRGPELSDKGSRGTRGSQADGHSSSGNYHDSWESRSS
YADRDRYDSRDQARDSSFERRHSERDRRDNRERDQRASSPVRHQGRSDDLERDERREERR
VDRSDDRRDERARERERERERDRERERERDREREREKERELERDRARERERDRERDKDRE
RERDRDRDHDREREREREREKEREREREERERERERERDRERERERERGRDRDKERERQR
DWDDKEKGREDRRDKREDIREERGSRDVHEERKSKKRHRNESSPSPRQSPKRRRDHSPDS
DAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHVTEERQSRWKEEERKSDRKESSRRYEEP
EFKERVSSADKQREQPDTSEGSRSRVQENLGHRPSEERDASDRMHDDSKKKSKIQKKTTK
KKKDDDSGVERYTNEPATEESQVFSPKKGQKRKNVEKKRKRSKGDSEVSDEEIVPHHKKK
KGPRTPPVTKEELVEAPPEKAVAEAPTKREDTTFSDWSDEDVPERGDIVVPERTADDSHR
KNHRPRVEKVEAPHVTIEDGAHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGDDQ
TARKRILHSSSRDRDRDRDRDREKKSLEITERKSRIDQLKRGEPSRSTSSDRQDSRSHSS
RRSSPESDRQVHSRSGSFDSRERLQERDRHDHDRERERDRREGRQRDWDRDVDKDWPRSR
ERDRLRERERDREKRRELERERDRQLPDPAERERERTLDISSQKESTKHSETKLDRDHEK
EFDGACRDSAASEKEKTDKDLGPSQGFEDGNEAEKVESLEGGEDEAKTNDVQSLGSGAGE
YEPISDDELDEILAGDAEKREDQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREPGAAL
LKFTPGAVMLRVGISKRLAGPELFTKIKETCQRVLEKPKDAENLFEHELGALNMAALRRK
EERAGLLSNLGPCCKALCFRRDSAIRKQLMKNEKGATKQTYTNSGAMDSDLLRLSLRLFK
RKTVCQVPGQEKTEDSKIPQPALQQEVCVT
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatccgatagcaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggagatcttcgggaaagaatgaagaacaaacgtcaagatgttgaggcagagcca
cagaaacgaagtacagaggaatcatcctctcctgttaggaaagagtcctcacgaggaaga
cacagagaaaaggaggatatcaaaattacaaaggagcgaacaccagaaagcgaagaggaa
aatggggattgggaaacaaatagagaagactctgacaatggagatgttaattatgattat
gaccatgagctgtctttggaaatgaagcgccaaaagattcagagagaacttatgaaattg
gaacaggaaaacatggagaaacgagaggaaatagtaattaaaaaagagatttctccagag
gtggttagatctaaattatcaccatcaccatcaccacgaaagtccagcaaatctccaaaa
cgaagatccagtcccaaatcatcatcttcagctggtaaaaaagacaagaaagcatctact
gtctcttcaccacttttggagcagcagaggagttctaaaagtactcagagtaaaaagaaa
ggtcctcgcacccctagccctcctcctccagtacaagaggaaactcccctggggaaaaaa
cacaaggaaaaacataaagcaaaagaacgttcagaagaaaaggcaagggacgtgaaagag
agagggcgtgactttgaaaggcacaaggagaaaaaagagaagcagagggatccgtctgaa
agctcccgtcgacagaagcgttctcctagtcctgcagatcactctggcagtaattcttcc
ccttccagggagtactcaccgcctgctgcaaggcgaaagcaaacctcccgtgctccagcc
aaggcagccactcacaaacataacttctcaccctcgcgcaggtctgcttctccatcaggt
cagcatcattctcccatatcctccagacatcactcctcgtcctcacagtcaggctcctct
gttcaaagacattctccttccccacaccgtaaaaggactccttctccgtcctatcaaagg
acagcctccccgcctgcgaggcggtcatcttccccctatcccccacactcttcctctccg
cctcagaggaagcgcagtccttcgagacaccgctctcctgcaagagacaagggaaggcac
gatcgcgatcggacgtcacagtctcatgacaggcgccacgagaggcgggacgaaacaaga
gggaaaagagaaaaagaaagagaaacaagagatgatcgtgactatgaccaagaacagagt
acctccagggaccacagggatgacagagagtctcgtgatggaagagaccggagggacacg
agagacaccagagatcggcgggagccgcgggaatccagagatactcgagactccagagac
acgcgggattatagcagggacaccaaggacagccgtgaccagagggactcgcgctccacg
cgagactcccatgactacagggacagagagagtcgagatgcccacaaaaaggatgaccag
tatcaggatgacttgcgtagctatgggagatcccatggcagagaggaaagctctcgtgct
gaaacaaggaatgactccagaagtgactccagaaatgagagcagaagtgatagaattggc
agaagtcgaggccgaggtccagaattatctgacaaaggaagtcgggggaccagaggatcc
caggctgatggtcacagcagtagtgggaactaccatgacagctgggaatcgaggagtagc
tacgctgatcgggatcgctatgacagtcgcgatcaagcaagggactcgtcctttgagaga
agacacagtgaacgcgataggcgtgacaacagagaaagagatcagagagcaagctcgccg
gtacggcaccaaggacggagtgacgatctcgagcgggatgagaggagagaggagcgaaga
gtggatcggtctgatgacagaagagatgaaagggcccgggagagagagcgggaaagggag
agggaccgagagagagaaagagaaagagaccgggaaagagagagggagaaagaaagagag
ttggaacgagatcgtgctcgggaacgggagagggacagagagcgggacaaagacagggag
cgtgagcgggaccgagacagagaccacgacagggaaagggaacgagagagggagagggag
aaggagcgggagcgagagcgggaggaacgagaaagggagcgagaacgagagagagatcgg
gagcgggagcgcgaaagggagagaggtcgagacagagacaaagagagagagcgccagaga
gactgggacgacaaagaaaaaggaagggaagaccgcagggataagagagaagatattcga
gaagaaagaggctcaagagatgtccacgaggaaagaaaatccaagaagcgtcacagaaac
gaaagcagtccaagtccccgtcaatcacccaaacgtcgccgtgatcattctcctgatagc
gatgcctacaacagtggagatgataaaaatgaaaagcacagactcctgagccaggttgtg
cggccgcaggaatcccggtcactgagcccctctcatgtcacggaggagcggcagagtcgc
tggaaagaagaagagcgaaaatcggacagaaaggaaagttcccgacgctatgaagaacca
gagtttaaagagagagtttcttcagcagataagcaaagagagcagccagatacttcagaa
ggttcccggtccagggttcaggaaaatcttggacaccgtccttctgaagaaagagatgct
tctgatagaatgcatgatgacagcaagaagaaatctaagatacagaaaaagaccacaaaa
aagaagaaagatgatgacagtggggtggaaaggtacactaatgaaccagcaaccgaggaa
agccaggtcttttcccctaagaaaggtcaaaaaagaaaaaatgtggaaaaaaagcggaag
agatccaagggtgattctgaagtttctgacgaagaaattgttccacatcataaaaagaaa
aaaggcccaagaacccctcctgtaactaaagaagaactggttgaagcaccacctgagaaa
gcagtggcagaagcccccacaaaaagagaagatacaacatttagtgactggtcagatgaa
gatgttcctgaacgtggtgacattgttgttccagaaagaaccgctgacgattcccacaga
aaaaatcacaggccgagggtagaaaaagtggaagcccctcatgttactatagaggatgga
gcacaccgtaagcctgtggaccagaagcgcagcagcagcctcggcagcaatcggagccac
gcctccagcaggctcaggtccccctccaatgagtcagcgcatcgcagtggagacgatcag
actgcacggaagaggatcctgcacagtagctctagggacagggacagggatagggacagg
gacagggagaagaagagcttagaaatcactgaaaggaagtctcgaattgatcagctgaaa
cgaggggagcccagtcgcagcacatcttcagatcgtcaagattcaagaagccacagctca
agaagaagttcccctgagtcagatcgtcaggttcattccagatctgggtcctttgatagc
agggaaaggctccaggagcgagatcgacatgaccacgatcgggaacgagagagggacagg
agagaggggaggcagagggactgggaccgagatgtggacaaggactggccgaggagccgg
gagcgagacaggctcagggagcgagagagggacagggagaaaagacgggagctggagaga
gagagggaccggcagctgcctgatcctgctgaaagggagagagagagaactcttgacatc
tcctctcaaaaggaatccacaaagcacagtgaaacaaaactggacagagatcacgaaaag
gagtttgatggtgcttgccgggactcagcggcttcagagaaggagaaaacagacaaagat
ttaggaccttcacaaggctttgaagatggaaatgaggccgaaaaggtagagagtctagaa
ggaggagaggatgaggcaaagactaatgatgtgcagtcactggggtctggtgctggagaa
tacgagcctatcagtgacgatgaactggatgaaattctggcaggtgatgctgaaaagcgt
gaggatcaacaggaggatgagaagatgcctggtaaaaatccagtggatgttatagatgta
gactggtccagtcttatgccaaagcagccaaaagaaccacgtgagcctggggctgcgctc
ttaaaattcacaccaggtgctgttatgttgagagttggcatttccaagcgattggcagga
ccagagctcttcaccaaaataaaagagacatgccagagagtgttggaaaaacctaaagat
gcagaaaacctttttgagcacgaactgggagcactgaacatggctgcacttcggcggaaa
gaagagagagcaggtcttctcagcaatctgggtccgtgctgcaaagcgctctgcttccgc
agggattctgccattcggaagcagctcatgaagaatgaaaagggtgcaacaaaacaaact
tacacaaattctggagcaatggacagcgacttgttacggttgagtctacggttattcaaa
cgaaagactgtgtgccaggttcctgggcaggaaaagacagaggacagcaaaattccacag
ccagctctccagcaggaagtatgtgtgacttga
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integrated database retrieval system
