Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448539
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Entry
135448539 CDS
T09958
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04620
Toll-like receptor signaling pathway
zle04621
NOD-like receptor signaling pathway
zle04622
RIG-I-like receptor signaling pathway
zle04623
Cytosolic DNA-sensing pathway
zle05164
Influenza A
zle05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135448539 (IRF7)
04621 NOD-like receptor signaling pathway
135448539 (IRF7)
04622 RIG-I-like receptor signaling pathway
135448539 (IRF7)
04623 Cytosolic DNA-sensing pathway
135448539 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135448539 (IRF7)
05168 Herpes simplex virus 1 infection
135448539 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135448539 (IRF7)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135448539 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
135448539
NCBI-ProteinID:
XP_064570716
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Position
5:complement(39702681..39706432)
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AA seq
512 aa
AA seq
DB search
MAAQEKEGEAQKLRFGQWLLNAINSGSYRGLRWIDSAHTIFRVPWKHNARKDITSSDLEV
FKGWAKVSGRYEEGSEDPAKWKTNFRCALSSTHLFKLEQDHSKRGDDPHKVFSIVSATLQ
DSKDGDSNIPNPVVDQKAAQQQLQLELHPQDMASAIAVPGSTDPIELSILEELLQQCDIS
PRDLGSWVPTGGFPAEDTPHQDIVLQPHQDTLLQPYTDTSQNSCFPPTTFPQWVPTVEQP
TLDTYQPTGLMPLEETAAGAMPPPCHLTEGTVPVQYAVEATVFVPTASPVPQPQLLVDNT
DDIMSILDVTIYYRGKELHREVVKGSRCLLTYQRPSQPWPWHVVHFPSPAGLPDRKQRRI
TEELLGIAGLQLELRAPKVFATRREKCKVFWALSRQLEGGEEPPPNLLCRDQETPIFDFN
EFCIELRDFRNGQRRRSPDFTIYLCFGQAFSNAKPKESKLILVKLVPKFCEYWYEQVLQE
GASSLDSRTISLQLSNSFDLMELIEQYNMQLG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcaggagaaagagggggaagcccagaagctgcggttcggacagtggctgctg
aacgccatcaacagcgggagctaccggggactgcgctggatcgactctgcccacaccatc
ttccgtgtcccctggaagcacaacgccaggaaggacatcaccagcagcgacctggaggtc
ttcaagggctgggcaaaggtcagtgggcggtatgaggaaggctccgaggacccggccaag
tggaagaccaacttccgctgtgccctgagcagcacccacttgttcaagctggaacaggac
cattccaagcgtggtgatgacccccacaaggtcttctccattgtctcagccacactccag
gacagcaaggacggagattccaacatccccaaccctgtggtggaccagaaggcagcacaa
cagcagctgcagctggagctccacccccaagacatggcctcagccatcgctgtcccagga
agcaccgaccccatagagctctcaattctggaggagctgctgcagcagtgtgacatctct
ccccgcgaccttggatcttgggtgcccacaggtggtttccctgcagaggacactccccac
caggacattgtgctccagcctcaccaggacaccctgctccagccttacacagacaccagc
cagaacagctgcttccctcccacgacatttccacagtgggtgcccacggtggagcaaccc
accttggacacctaccaaccaacaggcctcatgccactagaggagacagctgcaggagcc
atgccaccaccatgccacctgacggagggcacggtccctgtgcagtacgcggtggaggcg
acggtgttcgtgcccaccgccagccctgtgccacagccacagctgctggtggataacaca
gatgacatcatgtccatcctggatgtcaccatctactaccgggggaaggagctccaccgg
gaggtggtgaagggcagccgctgcctgctgacgtaccagcgccccagccagccatggccc
tggcacgtggtgcacttccccagccccgccggcctgcccgaccgcaagcagcggcgcatc
accgaggagctgctgggcatcgcggggctgcagctggagctacgcgcccccaaggtcttt
gccacccgccgggagaagtgcaaggtgttctgggccttgtcccggcagctcgaggggggc
gaggagcccccacccaacctgctctgtcgggaccaggaaacgcccatctttgacttcaat
gagttttgcatagagctgagggacttccgcaatggccaaaggcggcgatcccctgacttc
accatctacctctgctttgggcaggccttctccaacgccaagcctaaggagtccaagctc
atcctggtcaagctggtgcccaagttctgtgagtactggtacgagcaggtgctgcaggag
ggagcctcctccctggacagccgcaccatcagcctgcagctctccaactccttcgacctc
atggagctcatcgagcagtacaacatgcagctgggctga
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