Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448560
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Entry
135448560 CDS
T09958
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04150
mTOR signaling pathway
zle04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135448560 (LRP5)
04150 mTOR signaling pathway
135448560 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135448560 (LRP5)
Membrane trafficking [BR:
zle04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
135448560 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
135448560
NCBI-ProteinID:
XP_064570764
LinkDB
All DBs
Position
5:complement(39027870..39153100)
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AA seq
1618 aa
AA seq
DB search
MEAAAAAPLPLLLLLRLLAASVLRCEPGSAGASPFLLFANRRDVRLVDAGGTKLESTVVV
SGLEDAAAVDFQYSQGIVFWTDVSEEAIKQTYINQTGNVVQNVIISGLVSPDGLACDWIG
KKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERA
GMDSSMRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTH
PFALTLSGDTLYWTDWQTRSIHACNKRTGEKRREILSALYSPMDIQVLSPDRQPYFHTPC
EENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCKAGAEEVLLLARRTDLRRISLDM
PDFTDIILQIDNIRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGTGAQTLVTTEINHPD
GIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMGYMYWTDWG
ESPKIECAYLDGSERRVLVNTSLGWPNGLALDLEKNKLYWGDAKTDKIEVINVDGTMRKT
LLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKIKASRDIIIDQLPDLMGLKATSVTKA
FGTNSCAENNGGCSHLCFFTPQEARCACPIGLELLSDMKTCIIPEAFLVFTSRAAIHRIS
LETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDY
PEGMAVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKGYMYWTE
WGGKPRIVRAYMDGTNSITLVDKVGRANDLTIDYVDQRLYWTDLDTSMIESSNMLGQERE
IIADDLPHPFGLTQYSDYIYWTDWNLHSIERADKTNGKNRTLIQGHLDFVMDILVFHSSR
QDGLNDCVQNNGHCGHLCLAIPNGFRCGCAAHYTLDPNSRNCSSPASFLLFSQKSAISRM
IPDDQQSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNIIKRAKDDGTQPFTVMSTPN
QSQNPEKQPHDLSIDIYSHTLYWTCEATNSVNVHRLSGESIGMVLRGEHDRPRAIVVNAE
RGYMYFTNMQERAPKIERAALDGTEREVLFTTGLIRPVALVVDNKLGKLFWVDADLKRIE
SCDLSGANRVTLEDSNILQPMGLTVLGNHLYWIDRQQQMIERVEKVNGYKRTRIQGRIAH
LTGIHAVEELDMEEFSVHPCSRDNGGCSHICIAKGDGTPRCSCPEHLVLLQNLLTCGEPP
TCSPDQFTCATGEIDCIPMAWRCDGFPECDDQSDEDSCPICSASQFQCEKGQCIDAHLRC
NGEIDCQDKSDEADCDTICLPNQFRCASGQCILLKQQCDSFPDCIDGSDELMCEKSKPAS
DESQPHSSAIGPVIGIILSLFVMGGMYFVCQRVVCQRYAGPNSPFPHEYVSGTPHVPLNF
IAPGSSQHGTFTGISCGKSMISSMSLMGGSSGAPLYDRNHVTGASSSSSSSTKATFYPQI
LNPPPSPATDRSLYNAEMFYSSNIPSNTRSYRPYLIRGIAPPTTPCSTDVCDSDYTTSRW
KANKYYIDLNSDSDPYPPPPTPRSQYMSAEESCPPSPATERSYFHLYPPPPSPCTDSS
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcggccgcgccgctcccgctgctgctgctgctgcggctcctcgccgcc
tcggtgctgcgctgcgagccgggctcggccggggcgtctccctttctgctgtttgccaac
cggcgggacgtccggctggtggacgccgggggcaccaagctggagtccactgtggtggtc
agcggcctagaggatgctgctgccgtcgacttccagtattcacaaggcatcgttttctgg
acagatgtgagtgaagaagccatcaagcaaacttacattaaccaaactgggaatgtggtg
cagaatgtcatcatttctggtctggtttccccggacggcctggcgtgtgattggattggg
aaaaaactttattggacggattcagagaccaataggatagaagtagctaatctcaatgga
acatctagaaaagtcctcttctggcaagaccttgatcagcccagggcaatagctttggat
ccggctcatggatacatgtactggactgactggggtgaaacgccccggatagagcgggca
gggatggacagcagcatgcgcaagatcattgttgattccgacatttactggccaaatggg
ctcacgatagatctcgacgagcagaaactttactgggctgatgcaaaactgagtttcatt
catagggcaaatctggatggttcctttaggcaaaaagttgttgaaggtagcctcacgcac
ccgtttgccctgacgctgtctggggacactctgtactggacggactggcagacgcgctcc
atccacgcctgcaacaaacggacgggagagaagaggagggagatcctgtctgctctctac
tcacccatggacatccaggtcctgagccccgaccgacagccctactttcacactccatgt
gaggaaaacaacggtggttgctcccatctgtgcctgctgtctccaagggaccccttctac
agctgtgcctgtcccactggtgtgcagctggaagatgatggcaggacgtgcaaagcaggt
gctgaggaagtcttgctgctcgccagaagaactgacttgaggaggatttccctggacatg
ccggatttcactgacattattctgcagatagacaacatcagacatgcaattgccattgac
tatgaccctgtggaaggctacatctactggactgatgatgatgtgcgggcaattcgtcgt
gcctacctcgatggcactggggcccagactctggtgaccacggagatcaaccacccagat
gggattgctgtggactgggtggccaggaacctgtactggactgatactggcacggaccgc
atcgaggtgacgcggctgaacggcacgtccaggaagatccttatctcagaaaacctggat
gagcctcgagccattgtgctcaatcctgtcatgggctacatgtattggacagactggggt
gaaagcccaaagatagaatgtgcttatttggatggctcggaaaggcgagttctggtgaat
acttctcttgggtggcctaatggcttggcactggatcttgagaaaaacaagctttattgg
ggagatgcaaaaacagataaaattgaggtcataaacgtcgacggaacaatgaggaaaacc
ctcttagaagacaagcttccacacatatttgggttcacactgctgggggactacatctac
tggactgactggcagagaagaagcattgaaagggttcacaagataaaggccagcagagac
atcattattgatcagctgccagatttaatgggccttaaggcaacgagtgtcaccaaggca
tttggaactaattcatgcgcagagaacaatggaggctgcagccatctgtgtttctttaca
ccccaggaggccaggtgtgcctgtcccatcggccttgagctgttgagtgacatgaagact
tgcatcattcctgaagccttcttagttttcacaagcagagcagcaattcataggatttcc
cttgaaaccaataataatgatgttgctattcctcttactggagtcaaggaagcatctgct
ctggatttcgatgtctctgataacagaatctattggactgatgttagtttgaagaccata
agccgagctttcatgaatgggagctctgttgagcatgtgattgagtttgggctagattat
cctgagggaatggctgtggactggatgggcaagaacctctactgggcagatactggaacc
aatcgcatcgaagtcgcccgcctggatgggcagtacaggcaggtccttgtgtggaaggac
ctggacaacccaaggtctctggctcttgatcccaccaaaggatacatgtactggactgag
tggggaggcaagcccaggatcgtccgagcctacatggatgggacaaacagcatcactctg
gtggacaaagtggggcgtgccaatgacctcaccattgattatgtggaccaaaggctctac
tggactgacttggacacaagcatgattgagtcatcaaatatgctgggacaagaacgagaa
atcatagcagatgatctacctcatccatttggattaacccagtacagtgactacatctac
tggacagactggaatcttcacagcatagaaagagcagacaagaccaatgggaagaacagg
acccttattcagggccatctggattttgtgatggatatattggtcttccattcttctcgt
caggatggcttgaatgattgtgtgcagaataatggccattgtggtcacctgtgccttgcc
atcccaaatggatttaggtgtggctgtgctgctcattacaccttggatcccaacagcagg
aactgcagttcccctgccagtttcctgctatttagccagaagtctgccatcagcaggatg
atacctgatgatcagcaaagcccagatatcatcctacctatgcatggtctgaggaatgtc
aaggctattgattacgatcccttggataaattgatctactgggtggatggacgccagaac
attataaaaagagccaaagatgatggcacccagcctttcacggtgatgagtaccccaaac
caaagccagaacccggagaagcagccccacgacctcagcattgatatctacagccacacc
ctgtactggacctgcgaggccacgaattccgtcaatgtgcaccggctgagcggcgaatcc
atcgggatggtgctgcggggcgagcacgaccggcccagggccatcgtggtgaacgcggag
cgagggtacatgtacttcaccaacatgcaggagagagcccccaagattgagcgtgcagcc
ctggatggcacagagagagaagtgcttttcacaactggcttgatccgacccgtagcccta
gtggttgacaacaagcttgggaagcttttctgggtggatgcagatctgaagcgcattgag
agctgtgacctgtcaggtgccaaccgcgtgacgctggaggactccaacattcttcagccc
atgggactcaccgtgctggggaatcacctgtattggattgatcgtcagcagcagatgatt
gagagagtggagaaagtgaatgggtacaaaaggacaagaattcaaggcaggattgctcac
ctaacgggcattcatgctgtggaggagctggatatggaagaattctctgtgcatccatgc
tcccgtgacaatggtgggtgttcacacatctgcattgccaaaggggatggaactccaaga
tgttcatgccctgagcaccttgtgcttctgcagaatctcttaacatgtggagaacctcca
acttgttccccagaccagtttacgtgtgcaactggagagattgactgtatcccaatggca
tggaggtgtgatggctttcctgaatgtgatgaccagagtgatgaagacagctgccccata
tgctctgcatcccagttccagtgtgagaagggacagtgcattgatgcacacttgcggtgt
aatggagaaatcgactgtcaagataaatctgatgaagcagattgtgataccatttgcctg
cccaaccagttccgctgtgcaagcgggcagtgcatcctcctgaagcagcagtgcgactcc
tttcccgactgcatcgacggctctgacgagctcatgtgtgaaaaatcgaagccagcctca
gacgagtcgcagccgcacagcagtgctattggccctgtcattgggataatcctgtccctg
tttgtcatgggggggatgtactttgtgtgccagcgcgtggtgtgccagcgctacgcgggg
cccaacagccccttcccgcacgagtacgtcagcggcaccccgcacgtgcccctcaatttc
atcgctccgggcagctctcagcacggcaccttcactggcatctcttgtggaaagtccatg
attagctccatgagtctcatgggaggaagcagtggtgcccctttgtatgacagaaaccat
gttactggagcatcttcaagcagctcatccagcactaaagccactttctatccacagatt
ttgaaccctccaccttccccagctaccgatcgttccttatacaatgcagagatgttttat
tcctcaaacattccttcaaacacaagatcttacaggccgtacctgatacgagggatagct
ccacccacaaccccgtgcagcacagatgtctgtgacagtgactacaccacgagtcgatgg
aaggccaacaaatactacatagatttaaattcagactcagacccttacccccctcctccc
acacctcgcagtcagtacatgtcggcagaagagagttgccctccgtctcctgccacggaa
cgaagctactttcacctctacccccctccaccctctccttgtacagactcttcatga
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integrated database retrieval system
