Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448623
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Entry
135448623 CDS
T09958
Symbol
CARS1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135448623 (CARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zle01007
]
135448623 (CARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zle03016
]
135448623 (CARS1)
Enzymes [BR:
zle01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
135448623 (CARS1)
Amino acid related enzymes [BR:
zle01007
]
Aminoacyl-tRNA synthetase
Class I (G)
135448623 (CARS1)
Transfer RNA biogenesis [BR:
zle03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
135448623 (CARS1)
Prokaryotic type
135448623 (CARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DUF4484
Motif
Other DBs
NCBI-GeneID:
135448623
NCBI-ProteinID:
XP_064570888
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All DBs
Position
5:complement(42634612..42667900)
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AA seq
749 aa
AA seq
DB search
MAAAASAEHGKGKRVQPPWSPPEGTKHSRLCLYNSLTRSKEVFQPQNGKKVLWYCCGPTV
YDASHMGHARSYISFDILRRILRDYFKYDVFYCMNITDIDDKIIKRARQNHLFERYRESK
CTPDQLLEDVRTASELFSVKLNETTDPDKKQMLEKIQNAVKSAFDPLQEALQAKLPAEEI
SRCHETLLEEAKDLLSDWLDSKFGSQVTDNSIFSKLPKFWEGEFHKDMEALNVLPPDVLT
RVSEYVPEIVDFVKKIVDNGYGYVSNGSVYFDTMKFDASEKHSYAKLVPEAVGDQKALQE
GEGDLSISADRLSEKRSPNDFALWKSSKPGEPSWDSPWGKGRPGWHIECSAMGGSVLGES
MDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKD
ALKKHTARQLRLAFLMHSWKDTLDYSSNTMESAIQYEKFMNEFFLNVKDILRAPTDVTGQ
FQKWENQEAELNKNFYEKKAAIHEALCDNVDTRSVLEEMRFLVSQSNSYIAAKKSSRQMP
NRLLLENISSYLTQMLKIFGAIESDDAIGFPVGGTSQNINIESTVMPYLQVLSEFREGVR
QIAREKKVTEVLQLSDALRDDILPELGVRFEDHEGLPTVVKLVDKDTLLKEREEKKKIEE
EKKRKKEEAARKKQQQEAAKLEKMKIPPHEMFKLELDKYSMFDENGFPTHDTEGKELSKG
QIKKLKKLYETQEKLHKEYLQMVQNGSAN
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagccgccagcgccgagcacggtaaaggcaaacgtgtgcagcctccctggtct
ccccctgaagggacaaaacattccaggctctgcctctacaacagcctgacacgcagtaag
gaagtatttcagcctcagaatggaaaaaaggtcttgtggtattgctgtggtccaacagtt
tatgatgcttctcacatgggacatgccaggtcctacatctcatttgatatcctgagaaga
atcttgagggattattttaaatatgatgttttctattgtatgaatattacagatattgat
gacaagatcatcaagagagcaagacaaaatcacctttttgaacgatatagagagagcaaa
tgcacaccagatcagctgcttgaagatgttagaactgcctcagagctcttttcagttaaa
ctaaatgaaacaacagacccagataagaagcaaatgttggaaaaaattcaaaatgcagtc
aagtctgcttttgaccctctacaagaagctctccaagcaaagctccctgctgaagagatc
agcagatgtcatgagacactattggaagaagccaaagatttgctgtctgactggttggac
tcaaaatttggcagtcaggtgactgacaattccatattctcaaagctccccaagttctgg
gaaggggaatttcataaagatatggaagcactcaacgttttacctccagatgttttaaca
cgggttagtgaatatgtgccagaaattgtggattttgtgaagaagattgtggataatggt
tatgggtatgtgtctaatggatctgtatactttgatactatgaagtttgatgccagtgaa
aaacactcctatgctaagttggtgcctgaagctgtaggtgatcagaaagctcttcaagag
ggtgaaggtgacctgagcatctcagctgatcgcttaagtgagaaacgttctccaaatgat
tttgctttatggaagtcctccaagccaggagagccctcatgggactctccatggggaaag
ggtcgtccaggttggcacattgaatgttctgccatgggtggatctgttctaggagagtcg
atggacattcatggaggaggctttgatctccgatttcctcaccatgacaatgaactggct
cagtctgaggcatatttcgaaaatgatcactgggttcggtattttctgcatactggtcac
ttaacaattgctggctgtaaaatgtccaaatctttgaagaatttcattaccataaaagat
gcactgaagaaacacacagcacgacagttacggctggctttcctcatgcactcttggaag
gatacactggattattcaagtaataccatggagtcagctattcagtatgagaagtttatg
aatgagttttttttgaatgtgaaggatattcttcgagctcccactgatgtgacaggccag
tttcagaaatgggaaaatcaagaagcagagctgaacaaaaatttttacgagaagaaagca
gcgattcacgaagcactgtgtgacaatgttgacacccgctcggttttagaagaaatgcgc
ttcttagtcagccagagtaactcctatattgctgcaaagaaatcctccagacagatgcca
aacagacttcttttagaaaacatcagctcctatctcactcaaatgctaaagatttttggt
gccatagaaagtgatgatgcaattggttttcctgttggagggactagtcaaaacataaat
attgagtctacagtgatgccatacctccaagttctttctgagttcagagaaggagtgcga
caaattgccagagagaagaaagtaactgaagtgctgcagttgagtgatgctcttcgggat
gacatcctgcctgaacttggggttcgatttgaagatcatgaaggacttccaactgtggtt
aaattagtggataaggacacattattgaaagaaagagaagaaaagaaaaagatagaagaa
gagaaaaaaaggaagaaagaagaagcagccaggaaaaaacaacagcaggaagcagcaaaa
ctggaaaaaatgaagattccaccacatgaaatgtttaaattggaacttgacaaatattcc
atgtttgatgaaaatggatttcccacccatgatacagaaggcaaagaacttagcaaagga
caaattaagaagctaaagaaactttatgaaacccaagaaaagctacacaaggagtatcta
caaatggttcagaatggaagtgcaaattga
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